TCONS_00020054-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020054-protein
Unique NameTCONS_00020054-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length330

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020054-protein ID=TCONS_00020054-protein|Name=TCONS_00020054-protein|organism=Clytia hemisphaerica|type=polypeptide|length=330bp
SFEGQGPQLLLDKLCLCSKTKAVKSSSDWITLNVGGKLFTTTRNTLTRYP
DTMLARMFSISETWKSAVDANGAYLIDRSPEYFEPILNFLRQGILIINEG
VNQRGVLEEARFFGLIEIVNELESELQTIERQKQSVTRSEFMRLLMTTSN
VDKLRCQGVDLAGADLSYLDLSSINFKHANLSGANLKGASLGGCQFNLAD
LSNACLDDATLEGVQMKRVNLESASLKNCKFEATGTKNQKANLEGANLKE
ASLEGSQMSNACLRLAVLKEANMRNCVLRGATLAGADLENCDLTGADLEG
ANLRGTNVVGTIFLDIVAPLHMVQFEGPQS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011270XLOC_011270Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020054TCONS_00020054Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR003131T1-type_BTB
IPR0016465peptide_repeat
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0051260protein homooligomerization
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051260 protein homooligomerization
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 119..139
NoneNo IPR availableGENE3D3.30.1120.50coord: 273..329
e-value: 3.2E-14
score: 51.6
NoneNo IPR availableGENE3D2.160.20.80coord: 131..228
e-value: 1.8E-23
score: 82.0
NoneNo IPR availableGENE3D2.160.10.20coord: 229..272
e-value: 7.5E-9
score: 34.6
NoneNo IPR availableGENE3D3.30.710.10coord: 16..130
e-value: 1.2E-31
score: 108.6
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 155..315
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 28..130
e-value: 6.2E-17
score: 72.3
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 30..99
score: 8.752
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 30..118
e-value: 6.1E-22
score: 77.7
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 194..232
e-value: 2.1E-6
score: 27.1
coord: 271..307
e-value: 2.3E-12
score: 46.2
coord: 156..193
e-value: 2.1E-9
score: 36.7
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 27..131

Blast
[Close]
BLAST of TCONS_00020054-protein vs. Swiss-Prot (Human)
Match: KCTD9 (BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens GN=KCTD9 PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 7.194e-108
Identity = 167/301 (55.48%), Postives = 208/301 (69.10%), Query Frame = 0 
Query:   27 SDWITLNVGGKLFTTTRNTLT-RYPDTMLARMFSISETWKSAVDANGAYLIDRSPEYFEPILNFLRQGILIINEGVNQRGVLEEARFFGLIEIVNELESELQTIE--RQKQSVTRSEFMRLLMTTSNVDKLRCQGVDLAGADLSYLDLSSINFKHANLSGANLKGASLGGCQFNLADLSNACLDDATLEGVQMKRVNLESASLKNCKFEATGTKNQKANLEGANLKEASLEGSQMSNACLRLAVLKEANMRNCVLRGATLAGADLENCDLTGADLEGANLRGTNVVGTIFLDIVAPLHMVQ 324
            +DW+TLNVGG+ FTTTR+TL  + PD+MLA MF     W +  D  GA+LIDRSPEYFEPILN+LR G LI+N+G+N  GVLEEARFFG+  ++  LE  ++  +       ++R EF+R L+ T    +LRCQG++ +GADLS LDL  INFK ANLS  NL  A+L       ADLS + LD A L+GV+M   N E ASLK C FE       KANLEGANLK   +EGSQM+   LR+A LK A ++NC LRGATLAG DLENCDL+G DL+ ANLRG+NV G IF +++ PLHM Q
Sbjct:   88 TDWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPILNYLRHGQLIVNDGINLLGVLEEARFFGIDSLIEHLEVAIKNSQPPEDHSPISRKEFVRFLLATPTKSELRCQGLNFSGADLSRLDLRYINFKMANLSRCNLAHANLCCANLERADLSGSVLDCANLQGVKMLCSNAEGASLKLCNFE--DPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKNAKLKNCNLRGATLAGTDLENCDLSGCDLQEANLRGSNVKGAIFEEMLTPLHMSQ 386
The following BLAST results are available for this feature:
BLAST of TCONS_00020054-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCTD97.194e-10855.48BTB/POZ domain-containing protein KCTD9 OS=Homo sa... [more]
back to top