TCONS_00020223-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020223-protein
Unique NameTCONS_00020223-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length853

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020223-protein ID=TCONS_00020223-protein|Name=TCONS_00020223-protein|organism=Clytia hemisphaerica|type=polypeptide|length=853bp
MKAIGGTFQEDSIDEEDGIDCIDIDFDDGDGDAFIHQEPELAMESEEASP
AADIPQEHASPEKAALHTAASEDEEEENFGLKDIKIEVIDPSYAHFSGTD
TIDQSQTESNDDSSNLLGSKFEEISKKCSRSLNKPCHCENCQVLMDTYKE
FVQNRLKESKSPEPGPASSKKIRLAESPGALIRNCQKCGIDFPSYELYKE
HVRTEHPIYWKHIQLESDFKEKRKLIVMEAKKEPQPSKTNFFKKQLARQS
QVPIQSKVKVKAAKPLVPPSMPTMVPTMVPPPGMVAPTMLPHGMMPQAGM
VPQQGMAQPGMVPQPGMVPPGMMVPGPPVATSEKDGANPVTYFYPMLYPV
YFVMDKDGKKKRKGQPVPVPMAMPQMPQGMPPGPMMVPPQFVNIAPKKRK
KPEKVACGECGLTFQFKEELMLHMRIHSDKPYKCETCQLSFVNNVELKRH
YRTHSSFSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCK
MSFSNNVELKRHYRTHAFFKCKFCSESFVSWEQLVQHSANVHSKEETPST
PSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQK
HLKVHSIKQEPADEPGPSSSLPEGANQVVIIPPPSQVVFMNPTGHLPPGI
TQPGIPSAGMMPPVVNQPPTMEAVTSFATDIKKEPLDYDEIDEQLEEPDE
SATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQ
RKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAG
FLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTHVNSGHPGI
VAM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011352XLOC_011352Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020223TCONS_00020223Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 736..758
e-value: 0.071
score: 22.2
coord: 494..516
e-value: 0.035
score: 23.2
coord: 457..480
e-value: 0.0068
score: 25.6
coord: 764..786
e-value: 0.14
score: 21.3
coord: 405..427
e-value: 0.14
score: 21.3
coord: 519..542
e-value: 0.0021
score: 27.3
coord: 708..730
e-value: 0.0012
score: 28.2
coord: 583..605
e-value: 0.016
score: 24.3
coord: 820..842
e-value: 0.0011
score: 28.2
coord: 792..814
e-value: 0.0035
score: 26.6
coord: 432..454
e-value: 0.0014
score: 27.9
coord: 183..206
e-value: 0.53
score: 19.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 766..786
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 459..480
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 794..814
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 185..206
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 521..542
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 434..454
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 710..730
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 822..842
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 496..516
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 585..605
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 407..427
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 738..758
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 457..484
score: 11.593
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 820..847
score: 11.365
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 764..791
score: 14.44
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 432..455
score: 11.219
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 583..610
score: 11.801
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 792..819
score: 15.043
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 519..547
score: 11.261
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 494..517
score: 10.367
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 405..432
score: 10.949
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 736..763
score: 14.253
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 708..735
score: 15.293
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 786..838
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 745..801
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 457..516
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 518..542
coord: 578..605
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 703..754
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 406..454
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 99..193
e-value: 0.14
score: 11.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 765..785
e-value: 1.8E-14
score: 52.9
coord: 743..764
e-value: 3.7E-12
score: 45.6
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 820..842
e-value: 2.7E-5
score: 24.3
coord: 407..427
e-value: 0.0067
score: 16.7
coord: 519..542
e-value: 0.0082
score: 16.4
coord: 764..783
e-value: 7.7E-4
score: 19.7
coord: 432..454
e-value: 2.9E-4
score: 21.0
coord: 495..516
e-value: 2.8E-4
score: 21.1
coord: 792..814
e-value: 0.013
score: 15.8
coord: 708..730
e-value: 0.0045
score: 17.3
NoneNo IPR availableGENE3D3.30.160.60coord: 417..442
e-value: 2.0E-13
score: 49.7
coord: 491..531
e-value: 5.6E-9
score: 35.5
coord: 593..718
e-value: 2.6E-15
score: 55.8
NoneNo IPR availableGENE3D2.20.28.30coord: 719..742
e-value: 2.8E-12
score: 46.1
NoneNo IPR availableGENE3D2.10.69.10coord: 443..487
e-value: 2.5E-11
score: 43.1
coord: 194..416
e-value: 1.9E-6
score: 27.5
NoneNo IPR availableGENE3D3.30.160.60coord: 805..827
e-value: 6.3E-18
score: 64.4
coord: 532..592
e-value: 2.1E-9
score: 37.1
NoneNo IPR availableGENE3D3.30.160.60coord: 786..804
e-value: 1.6E-16
score: 59.7
NoneNo IPR availableGENE3D3.30.160.60coord: 828..845
e-value: 0.0089
score: 15.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 541..578
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..81

Blast
BLAST of TCONS_00020223-protein vs. Swiss-Prot (Human)
Match: ZN665 (Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.407e-48
Identity = 144/472 (30.51%), Postives = 204/472 (43.22%), Query Frame = 0
Query:  393 NIAPKKR----KKPEKVACGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSIKQEPADEPGPSSSLPEGANQVVIIPPPSQVVFMNPTGHLPPGITQPGIPSAGMMPPVVNQ-----PPTMEAVTSFATDIKKEPLDYDE------IDEQLEEPDESATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTH 842
            N+A  +R    +KP K  C ECG  F+   +L  H  IH+ +KPYKC+ C   F  N  L  H R H+    + C +C ++F+  S L  H+ + H  E        KP  CN C   F +N  L +H R H     +KC  C ++F     L +H   +H+ E+       P   ++      Q +  +       GE+ + C  C K+F     L  H  +H+      ++P   +   +              VF   + HL    +  GI S G  P   ++       T +    +     ++P   +E      +   L       T  K Y CN CG +F     L  H+RIHTGE+ YKC  CG  F   S   TH   HTGE+P+KC+ C   F Q  +L  H   HTGEKP+ CN C   F   S L  H+  HTG+KPYKC  C   FT + NL  H + H
Sbjct:  183 NLAGHQRIHTGEKPYK--CNECGKAFRAHSKLTTHQVIHTGEKPYKCKECGKCFTQNSHLASHRRIHTGEKPYKCNECGKAFSVRSSLTTHQ-TIHTGE--------KPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQI-IHTGEK-------PFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHT-----GEKPYKCNDCGK--------------VFTQNS-HLA---SHRGIHS-GEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTIHQTIHTGQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHTGDKPYKCNQCGKVFTQNSNLAKHRRIH 611          

HSP 2 Score: 175.252 bits (443), Expect = 3.065e-46
Identity = 150/527 (28.46%), Postives = 212/527 (40.23%), Query Frame = 0
Query:  367 VPVPMAMPQMPQGMPPGPMMVPPQFVNIAPKKRKKPEKVACGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSIKQ-EPADEPGPSSSLPEGANQVVIIPPPSQ-------VVFMNPTGHLP------PGITQPGIPSAGMMPPVVNQPPTMEAVTSFATDIK-----------------------KEPLDYDEIDEQLEEPDESA------TKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTGEKPYKCGHCNCSFTTSGNLKSHMKTHV 843
            V     +P++ Q    G +    Q V  +P  R K  K  C ECG  F     L  H RIH+ +KPY+C  C  +F     L  H   H+    + C +C + F+  S+L  H++   G          KP  CN C  +F  + +L  H   H     +KCK C + F     L  H   +H+ E+         N+  +    + S  T +      GE+ + C  C K F     L KH ++H+ ++    +E G + S+     +  II    +       V       HL        G         G    V +   T +A+ +     K                       ++P   DE  +   +  + A      T  K Y CN+CG  FS   SL  H+ IHTG++ YKC  CG  FR  S    H   HTGE+P+KC+ C   F    NL  H   HTGEKP+ CN C   F   S L  H R HTGEKPY+C  C  +F+    L +HM  H 
Sbjct:   78 VSFQSHLPELQQFQHEGKIYEYNQ-VEKSPNNRGKHYK--CDECGKVFSQNSRLTSHKRIHTGEKPYQCNKCGKAFTVRSNLTIHQVIHTGEKPYKCNECGKVFSQPSNLAGHQRIHTG---------EKPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCKECGKCFTQNSHLASHR-RIHTGEK-----PYKCNECGKAFSVRSSLTTHQTIH--TGEKPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQIIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHTGEKPYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTIHQTIHTGQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHT 584          

HSP 3 Score: 155.606 bits (392), Expect = 1.183e-39
Identity = 118/418 (28.23%), Postives = 177/418 (42.34%), Query Frame = 0
Query:  407 CGECGLTFQFKEELMLHMRIHS-DKPYKCETCQLSFVNNVELKRHYRTHSS---FSCIQCNESFTTHSHLQEHEKSKHGAEPLLPDSKSKPMTCNTCKMSFSNNVELKRHYRTHAF---FKCKFCSESFVSWEQLVQHSANVHSKEETPSTPSTPLNQSDETIDEKQSNDTSEDSENVVGEEDFTCYHCSKSFPTMDILQKHLKVHSIKQ-EPADEPGPSSSLPEGANQVVIIPPPSQVVFMNPTGHLPPGITQPGIPSAGMMPPVVNQPPTMEAVTSFATDIKKEPLDYDEIDEQLEEPDESATKNKHYACNQCGAMFSRMFSLNRHKRIHTGERGYKCEICGACFRTQSQRKTHSFTHTGERPFKCHLCPATFIQQGNLKRHIWTHTGEKPHVCNMCNAGFLSTSDLKRHIRTHTG 816
            C ECG  F  +  L  H  IH+ +KPYKC  C   F +N  L +H R H+    + C +C ++F+ HS+L +H+         +  +  KP  CN C   F+    L  H R H     ++C  C ++F     L  H A +H+ E+       P   +D      Q++  +       GE+ + C  C K+F     L +H +VH+ ++    +E G + S+                            +T       G  P   N    +    S           Y  I +++       T  K Y CN+CG  FS   +L  H+ IHTGE+ YKC  CG  F   S    H   HTGE+P++C+ C   F  +  L  H+  HTG+KP+ CN C   F   S+L +H R H+G
Sbjct:  255 CNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFRHNSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQ---------IIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQA-IHTGEK-------PYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVH-------------------------SSLTIHQTIHTGQKPYKCNDCGKVFRHNS-----------YLAIHQRIH------TGEKPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHTGDKPYKCNQCGKVFTQNSNLAKHRRIHSG 613          
The following BLAST results are available for this feature:
BLAST of TCONS_00020223-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN6651.407e-4830.51Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 ... [more]
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