TCONS_00020435-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020435-protein
Unique NameTCONS_00020435-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length658

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020435-protein ID=TCONS_00020435-protein|Name=TCONS_00020435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=658bp
MRFINLVLLGVFLLVRIKGEELAVTLETLSQGTNGIVRVRFTGVFDKSDF
ISIGGKNFFSQSDSRKTTKVDTGKQIGSILEIELTIIEADRSIEISRVTV
TEPDTRLINFNFNSFISDAVSKTVAAPTTDLNSAPTILYQNGNNNLTAVP
QYTETEGLDFRLHAQITRTPGVDGTISYQWYRFNSARSNLPVAVPNGNTP
SLHVKEVDSADTGAYFCVIKLKESVRKSDSITLIVNYLTLEPVSVSISGS
SFVAEGLPASFSCSASSNLPDITVGWFNGTTLLKEGTSRVDLIFDPIQRG
QSGHYTCKASVTGLNQEKVSVNRVKVLYLDDPKIRGHTVINNTLTLFPND
SSVLHCDSASNPSGITYTFLEDGNVQERSDNSFIVKTGGGNYSCVVQNDF
MMKRLDFQVIAGSLQGPNGEGGNGGNAGTTGASTGDGDDFWTTEMIIIVV
MAICFLIIFIILVIFICCLMKRLDFQEKEVKPRQPKDEVQLTENFYKPQP
DFQNNYINDTFTSQRGPTLGDIHITVEEPKENKTTSHLSLSSEEYRSSNN
DLRQPNGLSNGHANSKENLSTAPPPHVVTDEYATVNKQRKEKAPREHNTK
ERKDRKNRRDKKDGEQKKSRSKNRAYEEVGENSKGAWDQANDSRASATNR
NYDNEEYC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011479XLOC_011479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020435TCONS_00020435Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003599Ig_sub
IPR013783Ig-like_fold
IPR007110Ig-like_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003599Immunoglobulin subtypeSMARTSM00409IG_3ccoord: 248..327
e-value: 5.3E-5
score: 32.6
coord: 149..236
e-value: 0.0035
score: 26.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 146..261
e-value: 3.0E-11
score: 43.0
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 330..421
e-value: 8.6E-5
score: 22.2
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 262..323
e-value: 2.6E-8
score: 33.4
IPR007110Immunoglobulin-like domainPFAMPF13895Ig_2coord: 251..314
e-value: 1.9E-6
score: 28.0
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 332..406
score: 7.794
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 135..232
score: 8.103
IPR007110Immunoglobulin-like domainPROSITEPS50835IG_LIKEcoord: 242..320
score: 10.789
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 148..236
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 242..317
IPR007110Immunoglobulin-like domainSUPERFAMILY48726Immunoglobulincoord: 345..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 526..658
NoneNo IPR availableCDDcd00096Igcoord: 259..318
e-value: 0.00801076
score: 34.0019

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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