TCONS_00020893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020893-protein
Unique NameTCONS_00020893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length326

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020893-protein ID=TCONS_00020893-protein|Name=TCONS_00020893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MVLWKRSNPIKYGVAVSRFNGNGHHMLPLDFGEAVLIYEETENSDWFLGC
SLVNRNQKGIFPQSYIHIKWTIESESKDDVDVAHSKELSAVLEITSVLQE
WGEIWKQLFVKKADETDQVRKLLQDLLSRRRQVLSGALTADQLKQVKTEI
GNKIDFGNKLLGLDLVVRDNEGTVIDVDSTGIIELYKMHWQSAERLEEPA
SSRKKKAPNSNMLQFNGHNLYVSMKNVVCQIDDESEVFLTLYDGREGQFI
SEHYMVSWTDKGMPKELDKLHNMTCLFTDLGMQDLQRDKLYIVCQIIRYG
KMDMNSKEKKKSQTKDLRRPFGVAGD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011718XLOC_011718Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020893TCONS_00020893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001452SH3_domain
IPR032376DOCK_N
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001452SH3 domainSMARTSM00326SH3_2coord: 11..70
e-value: 5.3E-4
score: 29.3
IPR001452SH3 domainPROSITEPS50002SH3coord: 8..71
score: 9.29
IPR001452SH3 domainSUPERFAMILY50044SH3-domaincoord: 7..68
IPR032376Dedicator of cytokinesis, N-terminal domainPFAMPF16172DOCK_Ncoord: 83..324
e-value: 6.9E-74
score: 248.9
NoneNo IPR availableGENE3D2.30.30.40coord: 9..211
e-value: 2.6E-9
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..326
NoneNo IPR availableCDDcd11872SH3_DOCK_ABcoord: 12..69
e-value: 3.45216E-20
score: 81.0897

Blast
[Close]
BLAST of TCONS_00020893-protein vs. Swiss-Prot (Human)
Match: DOCK2 (Dedicator of cytokinesis protein 2 OS=Homo sapiens GN=DOCK2 PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 5.809e-80
Identity = 134/330 (40.61%), Postives = 213/330 (64.55%), Query Frame = 0 
Query:    1 MVLWKRSNPIKYGVAVSRFNGNGHHMLPLDFGEAVLIYEETENSDWFLGCSLVNRNQKGIFPQSYIHIKWTIESESKDDVDVAHSKELSAVLEITSVLQEWGEIWKQLFV-KKADETDQVRKLLQDLLSRRRQVLSGALTADQLKQVKTEIGNKIDFGNKLLGLDLVVRDNEGTVIDVDSTGIIELYKMHWQSAERL-----EEPASSRKKKAPNSNMLQFNGHNLYVSMKNVVCQIDDESEVFLTLYDGREGQFISEHYMVSWTDKGMPKELDKLHNMTCLFTDLGMQDLQRDKLYIVCQIIRYGKMDMNSKEKKKSQTKDLRRPFGVA 324
            M  W++++  ++GVA+  F G+G   L L  G+ V I E     DW+ G  + ++  +GIFP+S+IHIK  +  E + + +     E+    E+T+ L EWG IWKQL+V  K +   QV+ ++ DL+  R Q+LSG L  D+LK++K ++ +KID+GNK+L LDL+VRD +G ++D D+T +I L+  H ++ +++     EE +  +   A  S +     H+LYV ++N VC+I +++E+F++LYD  +   ISE+Y+V W  +G PKE++ L+N+  +FTDLG +DL RDK+Y++CQI+R GKMD+     KK  T+ LRRPFGVA
Sbjct:    1 MAPWRKADKERHGVAIYNFQGSGAPQLSLQIGDVVRIQETC--GDWYRGYLIKHKMLQGIFPKSFIHIK-EVTVEKRRNTENIIPAEIPLAQEVTTTLWEWGSIWKQLYVASKKERFLQVQSMMYDLMEWRSQLLSGTLPKDELKELKQKVTSKIDYGNKILELDLIVRDEDGNILDPDNTSVISLFHAHEEATDKITERIKEEMSKDQPDYAMYSRISSSPTHSLYVFVRNFVCRIGEDAELFMSLYDPNKQTVISENYLVRWGSRGFPKEIEMLNNLKVVFTDLGNKDLNRDKIYLICQIVRVGKMDLKDTGAKKC-TQGLRRPFGVA 326
The following BLAST results are available for this feature:
BLAST of TCONS_00020893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DOCK25.809e-8040.61Dedicator of cytokinesis protein 2 OS=Homo sapiens... [more]
back to top