TCONS_00020962-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020962-protein
Unique NameTCONS_00020962-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length390

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020962-protein ID=TCONS_00020962-protein|Name=TCONS_00020962-protein|organism=Clytia hemisphaerica|type=polypeptide|length=390bp
QPLSKEVMDGLSTDVGMPVDVWTPFQRQPDYSYLGFDGSQVAPSHYFYEN
AATKCLKFDGRNNGGLVPADCTTNIATLCYYDPNVLWPEDTAGDLDIGGA
GDNSIPLIECGLDNVNVTAYKGYAEACYDAVTHPETSHGKAMAYCGELQG
TLPSMPLRYIYERFNNFTKTLGINGTVWIGGHDRIEEGLVEWQDESPDGE
SASITDNNNSTNNCLAFNTDTEELLWEDCNSHHKFLCQWKEERSACALSK
GYRFSNKCYKRLTSVDGETREQAYSLCQQWDGNATLFMPDNEIEALFIQE
SSNNEEEIWVDSTDEVAEGQWVWRDGKTRAFINRYHFNNLENSCSYFVVY
KNQFFANPCDRTGRPPFLTLCQSASPVPQTTTTTTTAATT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011752XLOC_011752Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020962TCONS_00020962Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001304C-type lectin-likeSMARTSM00034CLECT_2coord: 119..238
e-value: 0.0011
score: 28.2
coord: 246..372
e-value: 2.4E-5
score: 33.8
IPR001304C-type lectin-likePFAMPF00059Lectin_Ccoord: 268..347
e-value: 9.3E-7
score: 29.5
coord: 138..238
e-value: 1.8E-9
score: 38.2
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 254..361
score: 10.599
IPR001304C-type lectin-likePROSITEPS50041C_TYPE_LECTIN_2coord: 123..238
score: 9.191
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 115..249
e-value: 1.3E-15
score: 57.2
IPR016186C-type lectin-like/link domainGENE3D3.10.100.10coord: 250..376
e-value: 2.3E-11
score: 43.3
NoneNo IPR availableCDDcd00037CLECTcoord: 127..238
e-value: 9.01655E-8
score: 48.385
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 121..240
IPR016187C-type lectin foldSUPERFAMILY56436C-type lectin-likecoord: 252..362

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020962-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top