TCONS_00021079-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021079-protein
Unique NameTCONS_00021079-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length201

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021079-protein ID=TCONS_00021079-protein|Name=TCONS_00021079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MKQSLNPRDSGKYIAENTKYVQIQHKEIPKAALRLKEVMGRNKYSIKKWK
EWPLHPKAMNDDTLHWILTVDTLNFSFWLPRNEPQFQVEYKGKTYEDYEA
LCACVNRAVEEGILITTASYNKEISLETVNQVFRSSNGTTLPMLKQRWEN
LRQVGLVLFEKFNGNFANVIKEASGDVEKLIEXVKNLTEISRMLSRKLVK
M
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011813XLOC_011813Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021079TCONS_00021079Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019438Q_salvage
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..182
NoneNo IPR availableCOILSCoilCoilcoord: 184..197
IPR019438Potential Queuosine, Q, salvage protein familyPFAMPF10343Q_salvagecoord: 54..185
e-value: 7.3E-39
score: 133.9

Blast
[Close]
BLAST of TCONS_00021079-protein vs. Swiss-Prot (Human)
Match: QSPP (Queuosine salvage protein OS=Homo sapiens GN=C9orf64 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.388e-42
Identity = 71/185 (38.38%), Postives = 113/185 (61.08%), Query Frame = 0 
Query:    1 MKQSLNPRDSGKYIAENTKYVQIQHKEIPKAALRLKEVMGRNKYSIKKWKEW-PLHPKAMNDDTLHWILTVDTLNFSFWLPRNEPQFQVEYKGKTYEDYEALCACVNRAVEEGILITTASYNKEISLETVNQVFRSSNGTTLPMLKQRWENLRQVGLVLFEKFNGNFANVIKEASGDVEKLIEXV 184
            M   LNPR+S K+IAEN++ V I    + + A  L       +  ++ WK    L+P+A ++  ++W+   DTLNFSFW  ++E +  V Y+GKTY  Y +LCA VNRA++EGI IT+ASY   ++L+ V  + RS    ++P++++R   L + G +L EKF G+F N ++E+    +KL+  V
Sbjct:    1 MDGLLNPRESSKFIAENSRDVFIDSGGVRRVAELLLAKAAGPELRVEGWKALHELNPRAADEAAVNWVFVTDTLNFSFWSEQDEHKCVVRYRGKTYSGYWSLCAAVNRALDEGIPITSASYYATVTLDQVRNILRSDTDVSMPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLV 185
The following BLAST results are available for this feature:
BLAST of TCONS_00021079-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QSPP1.388e-4238.38Queuosine salvage protein OS=Homo sapiens GN=C9orf... [more]
back to top