TCONS_00021135-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021135-protein
Unique NameTCONS_00021135-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2183

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021135-protein ID=TCONS_00021135-protein|Name=TCONS_00021135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2183bp
MKLNVKRNVLSYGIYKICLTVVMETEPRFQGVQCGYVKIIPSPLTPIIKG
GDQLNVPYEDPYLIDATLSEDADNPHNLSNIEFYYLCCTLLDPEFNLTYE
EIKSLPVKNPDFTANPDTTDPSLGGCYGNGMGRLFSSTTDTKVKLRTDFM
KSGISVEIILVMYSGQPSDESRLSTTKQILFIMEGKPPLLQLVSSRNAGR
YVSYDKEQVFIGDCQANCEGELTFQWKLNQCTSENSTCDHETPPTQLESM
LKTKVSNNSLYYHTKSSVYAMDQWYLIVFRAYRDQRTFGEVSFRFLVNFN
PSGGSCTASPSSGTVLEDKFQMICSGWQDLHQPLTYRFYTQKDGLMNIFC
TESQFSECKTLLPIGDVEGEYRLPVYVMISDNIGGSTVYKFNVTVNLGPE
IQTQLTTVGSLFTTTTSNQSSESESLLNSGDYESLVNLAGASTSILNSQI
TMDTHDNLNGTGANVTKEELEQQLQEKMLRIELRDSIFNQVASIPVTDIE
SINIVTGSISSLFEDPFEISQATQQKAVSLMETMISTVDTLQDIDQASGA
MSNILSISSKMIQSSGAISSVIDPNNTKTEALRTGGVNETESKHLINQVE
SQLQSVLDILTNFAVPGSQTVVIETKDAILAATKLPQSTDDVASVHVGGV
GTKFNQSIVEKNNTYSSEFERAQNSLTVQLRKTENPFTYDSTASKVKSSI
TGINFASSNGDLMKVNGTQDPIEITIANKAPEIHPEEVTMGIQPDGTQQN
FHRITLQNESFRAIIKPVDENVIIRVYLREFKRPSPEKYSFSWVLPDNSS
CRWVNDTEHWNEAIDLLKVNISEDVTCSRDVYSVFVSDEHNLSDVYLGVF
YTPSNETSQESHENLNSRKRRSSTNQNTPGPIDIDKVDEEFCVVIKPPPP
TPAPTLPPGEWVEQPPLITNASLNYSIEITKAKCLFWDPVNETWGSNGCV
VGIETTPSTTQCLCNHLTNFGGDVMVAPNPIDMDQVFAGLKNLGDNLGVL
MVIITLWLLYVILLVWAKRKDRKDMVDEQMIVVDCTKSEPIEQTVLLNIV
TGAGFGCGTTANVFCILSGEKGKTQIIPLRYEGRKMFQSRSTVAIKVHLP
TNIGNLTSIRVFHDNSGTSPSWFLRSILAIDLQNHQNYNFVCDKWLAVES
KDGQIERNLTLADEKDLKQFHLVFASTVSKSLVDGHIWFSVFMRPKHSPF
TRVRRLSACLALIFLVMLTNAMFFGAGDNPGSRKVVWLGNFKINFTGIIV
GIQSAFIIVPPSIIIVEIFRRLGPKKEKNQNKVNLKDKNHDKTKTDNDHT
DTKSLVQKDQNLTQPNPDPKSTEPIKKKPFMLPNQCQYIAYFLVFACVGS
SSLVCFFYSMMWGPRKSNEWLASMFTGFFQSVLVIQPIKAVVLAVLMAAI
LKKPVKQDVTNEKNLDIKTNMKTKKKKEYEEGEESNDEEEDECLSGDDGI
ITADEVPIIRPSDSELEKSRKQKIREKMTGIVIKDIATYLIFLLIVAKLA
YMEKDFHTYIYRQDMVNMLKEATYTFGPKFESISNHGYFYSWMRDTLIPG
VFAGPWYNDDLVKHQGFIDNHESFLVSIPRIRQVRVQENSCPLPSIFDGV
INHCEATYKGSLEDQVDYGIAWVDLNMTITAPSASRRRRSPWIVRNIKQI
TTTENIRKRKRRQTTTEETGGMQYQKMDTGKSGSLRRRKKLKNQQNGAPI
YYVSPEALLPDGSVVSCFDRWEHFSASELRGFPVVGRTNTYPGSGYVANL
GYNEETSWTVLADLHIHNWLDKQTRAIFAEFTVYNGNVNLFMTAFLYLET
LPTGGAFPWSDFKVFNGYRYSAKDGLQSMWAEMIFICFIIYFGVIEIRKM
LKLKFNYFKSFFNLIEATLMPLYLVMFALILIRWLTTSANIKTFKQNPKD
FVSFQYAAAADEALMSVIGIVCFLLNLKFLRLLQFAKLFFVIGQVIKSFT
VPLLYFMVPFTMYFLLFCWSAHLAFGNQLEEFQTIPRTITTQFLHLLGAT
DFESITDARPVVGSLYFLAYSGFMLFVAFNMFMAIICEAIDDDFDEEFEK
QAGDIQVAEYFTNKLKLLLGRNIDDEIRIDGDDVNEKADSQKLIEIEEIL
MTFEKSLSRLDSFVDAIHEDFESEKQCTEMCDMLVETSLSSSGGTEETQD
QNISTHFNEAETLDDVFDESFASLDTVSEIIEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011838XLOC_011838Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021135TCONS_00021135Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001024PLAT/LH2_dom
IPR000203GPS
IPR002859PKD/REJ-like
IPR013122PKD1_2_channel
IPR014010REJ_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1422..1442
NoneNo IPR availableGENE3D1.20.120.350coord: 2008..2154
e-value: 0.13
score: 10.9
coord: 1241..1942
e-value: 7.4E-6
score: 24.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1423..1445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1661..1685
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1279..1326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 855..881
IPR001024PLAT/LH2 domainSMARTSM00308LH2_4coord: 1043..1162
e-value: 1.1E-5
score: 33.3
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 1047..1152
e-value: 2.0E-15
score: 57.3
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 1046..1170
e-value: 2.6E-32
score: 111.0
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 1043..1160
score: 31.314
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 1047..1154
IPR000203GPS motifSMARTSM00303GPS_3coord: 930..979
e-value: 1.2E-9
score: 48.0
IPR000203GPS motifPFAMPF01825GPScoord: 933..970
e-value: 2.6E-8
score: 34.3
IPR000203GPS motifPROSITEPS50221GPScoord: 931..980
score: 12.825
IPR002859PKD/REJ-like domainPFAMPF02010REJcoord: 3..438
e-value: 1.2E-52
score: 179.1
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 1529..2039
e-value: 1.3E-75
score: 254.6
IPR014010REJ domainPROSITEPS51111REJcoord: 1..527
score: 12.661

Blast
BLAST of TCONS_00021135-protein vs. Swiss-Prot (Human)
Match: PKDRE (Polycystic kidney disease and receptor for egg jelly-related protein OS=Homo sapiens GN=PKDREJ PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 2.075e-66
Identity = 287/1241 (23.13%), Postives = 506/1241 (40.77%), Query Frame = 0
Query:  927 IEITKAKCLFWDPVNETWGSNGCVVGIETTPSTTQCLCN-------------------HLTNFGGDVMVAPNPIDMDQVFAGLKNLGDNLGVLMVIITLWLLYVILLVWAKRKDRKDMVDEQMIVVDCTKSEPIEQTV-LLNIVTGAGFGCGTTANVFCILSGEKGKTQIIPLRYEGRKMFQSRSTVAIKVHLPTNIGNLTSIRVFHDNSGTSPSWFLRSILAIDLQNHQNYNFVCDKWLAVESKDGQIER--NLTLADEK-DLKQFHLVFASTVSKSLVDGHIWFSVFMRPKHSPFTRVRRLSACLALIFLVMLTNAMFFGAG--DNPGSRKVVWLGNFKINFTGIIVGIQSAFIIVPPSIIIVEIF-----------RRLGPKKE------------------------------------------KNQNKVNLKDKN-HDKTK-----TDNDHTDTKSLVQKDQNL-TQPNPDPKSTEPIKKKP-FMLPNQCQYIAYFLVFACVGSSSLVCFFYSMMWGPRKSNEWLASMFTGFFQSVLVIQPIKAVVLAVLMAAILKKPVKQDVTNEKNLDIKTNMKTKKKKEYEEGEESNDEEEDECLSGDDGIITADEVPIIRP-SDSELEKSRKQKIREKMTGIVIKDIATYLIFLLIVAKLAYMEKDFHTYIYRQDMVNM--LKEATYTFGPKFESISNHGYFYSWMRDTLIPGVFAGPWYNDDLVKHQGFIDNHESFLVSIPRIRQVRVQ--ENSC-PLPSIFDGVIN---HCEATYKGSLEDQVDYGIAWVDLNMTITAPSASRRRRSPWIVRNIKQITTTENIRKRKRRQTTTEETGGMQYQKMDTGKSGSLRRRKKLKNQQNGAPIYYVSPEALLPDGSVVSCFDRWEHFSASELRGFPVVGRTNTYPGSGYVANLGYNEETSWTVLADLHIHNWLDKQTRAIFAEFTVYNGNVNLFMTAFLYLETLPTGGAFPWSDFKVFNGYRYSAKDGLQSMWAEMIFICFIIYFGVIEIRKMLKLKFNYFKSFFNLIEATLMPLYLVMFALILIRWLTTSANIKTFKQNPKDFVSFQYAAAADEALMSVIGIVCFLLNLKFLRLLQFAKLFF---VIGQVIKSFTVPLLYFMVPFTMYFLLFCWSAHLAFGNQLEEFQTIPRTITTQFLHLLGATDFESITDARPVVGSLYFLAYSGFMLFVAFNMFMAIICEAIDDDFDEEFEKQAGDIQVAEYFTNKLKLLL 2069
            I I   +CL    +   W    C++G +T+     C+C                    H       V+V PNP+D+      +K+L  N   L  ++ + LLYV L  WA  +D  D      ++V    ++P +    L+ I TG+ +G GT ANVF  L G    + +  L +         S     +   +++G++ SIRV+H+N G SPSW+L  I   +L +   + F+C KWL+V   D  ++R  ++T  DE+   K F  +    VS +L   H+WFS+F       F R++RLS CLA++   +L N MFF     +   SR+  ++         +++GI+S  I +P  ++I  +F           + + P+K                                           K   K   K K+ H K +     T   +T++ + ++ DQ++ ++ +P  K  + +KKKP  +LP  C Y+A+FLVFA    SS    FY + +G  KS EWL + F  F QSVL++QP K ++L+        KP        KNL   T  K  + +   +G   + EE        D I+      + +P ++ E+   +++K  ++   + +  I T+ IFL ++  L  + +    + Y Q + +   +  AT T   K E I      Y W+   L+P +      ++DL  +  F+    S ++ +P +RQVR +  E  C P        I    HC   Y    ED  +Y   W +++                                   +Q   E T G  Y+                     G    Y S   L   GS               L  FP   R N+      +    + +E +W V+ +L                 T +N ++NLF +  +  E    G          F+   +  K   +      I I F+ Y  V E   +++ + +Y +S +NL+   L  ++ V+  L L +    +  I+ +  NP+DF+ F   +  D  +  ++G   FLL L  L+ L++++ F+   +  + I++    + +     ++YF ++    +L FG     +  +  +  T F + + A      ++ R ++G L+  ++   M+ V  N+F A+I  A ++     +E+ + +++   Y   KL+ + 
Sbjct: 1097 ISIFSVQCLDMYGIQSEWREGYCILGEKTSWYEVHCICKNVVRARRQLGTIGLTGIHLHTHYVMAKVIVIPNPVDLR--LNIIKSLHQNPVTLFTVLFIILLYVGLAFWALYRDEMDQHLRGHVIV-LPDNDPYDNLCYLVTIFTGSRWGSGTRANVFVQLRGTVSTSDVHCLSHPHFTTLYRGSINTFLLTTKSDLGDIHSIRVWHNNEGRSPSWYLSRIKVENLFSRHIWLFICQKWLSV---DTTLDRTFHVTHPDERLTRKDFFFI---DVSSNLRKNHMWFSIFASVVAKTFNRLQRLSCCLAMLLSSLLCNIMFFNLNRQEQTESRERKYM-------RSMMIGIESVLITIPVQLLITFLFTCSQRKPQADLKEVSPQKHPLMSEASEHWEEYLRKWHAYETAKVHPREVAKPASKGKPRLPKASPKATSKPKHRHRKAQIKTPETLGPNTNSNNNIEDDQDVHSEQHPSQKDLQQLKKKPRIVLPWWCVYVAWFLVFATSSISSFFIVFYGLTYGYDKSIEWLFASFCSFCQSVLLVQPSKIILLSGFRT---NKP-----KYCKNLSWSTKYKYTEIR--LDGMRMHPEEMQRI---HDQIVRIRGTRMYQPLTEDEIRIFKRKKRIKRRALLFLSYILTHFIFLALLLILIVLLRHTDCFYYNQFIRDRFSMDLATVT---KLEDI------YRWLNSVLLPLL------HNDL--NPTFLPESSSKILGLPLMRQVRAKSSEKMCLPAEKFVQNSIRREIHCHPKYGIDPEDTKNYSGFWNEVD-----------------------------------KQAIDESTNGFTYKP-------------------QGTQWLYYSYGLLHTYGS-----------GGYALYFFPEQQRFNSTLRLKELQESNWLDEKTWAVVLEL-----------------TTFNPDINLFCSISVIFEVSQLGVVNTSISLHSFSLADFDRKASAEIYLYVAILIFFLAYV-VDEGCIIMQERASYVRSVYNLLNFALKCIFTVLIVLFLRKHFLATGIIRFYLSNPEDFIPFHAVSQVDHIMRIILG---FLLFLTILKTLRYSRFFYDVRLAQRAIQAALPGICHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHSTQTVFSYCVSAFQNTEFSNNR-ILGVLFLSSFMLVMICVLINLFQAVILSAYEEMKQPVYEEPSDEVEAMTYLCRKLRTMF 2204          
The following BLAST results are available for this feature:
BLAST of TCONS_00021135-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PKDRE2.075e-6623.13Polycystic kidney disease and receptor for egg jel... [more]
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