TCONS_00021343-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021343-protein
Unique NameTCONS_00021343-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021343-protein ID=TCONS_00021343-protein|Name=TCONS_00021343-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
MAKRLLNFYNRLLVAHPWKTTVISTGVLCASGDVLAQQFVEKTRKHDYQR
TFKFFVMGSCFIGPGLRVWYGVLEKYVTGAAQTLAIKKMLCDQLLWAPPF
IASFFCISDALSGKSMTDMKENLINNYPGALQVNYYIWPWVQLVNFYFVP
LSHRVLVVNCVALFWNTFLAYTVNKKSIPTAITVE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011954XLOC_011954Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021343TCONS_00021343Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 111..169
e-value: 1.1E-22
score: 79.9

Blast
[Close]
BLAST of TCONS_00021343-protein vs. Swiss-Prot (Human)
Match: MPV17 (Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.252e-47
Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0 
Query:    9 YNRLLVAHPWKTTVISTGVLCASGDVLAQQFVEKT--RKHDYQRTFKFFVMGSCFIGPGLRVWYGVLEKYVTGAAQTLAIKKMLCDQLLWAPPFIASFFCISDALSGKSMTDMKENLINNYPGALQVNYYIWPWVQLVNFYFVPLSHRVLVVNCVALFWNTFLAYTVNK 175
            Y R L AHPWK  V++ G L   GD+++QQ VE+   ++H   RT     +G  F+GP +  WY VL++++ G  +  A+KKML DQ  +AP F+  F  +  AL+G S  D    L  +YP AL  NYY+WP VQL NFY VPL +R+ VV CVA+ WN++L++  ++
Sbjct:    7 YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGPVVGGWYKVLDRFIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAHR 175
The following BLAST results are available for this feature:
BLAST of TCONS_00021343-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MPV171.252e-4743.20Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1[more]
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