TCONS_00021417-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021417-protein
Unique NameTCONS_00021417-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length239

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021417-protein ID=TCONS_00021417-protein|Name=TCONS_00021417-protein|organism=Clytia hemisphaerica|type=polypeptide|length=239bp
LWNVKGGNEQVPQRLIEESKSTVHYNCKITSIKKLENESSGKATYELESD
ASTFQSNQYDAVIVSVPLEDPRCFISCPEIKNWPQPTDLGQFQRCVSSII
QQPINAQYFGVKAASKLPDAITTTCEKAAADFGFIEINKTVHGNRSDPPT
YRVFSKEPLTEESLRKLFIMEENTAPEISVVDWLAYPHYSPPEKFLPFEL
DEGVFYVNAIERAASAMEMSAIGGRNAALLAVNYLENRN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012002XLOC_012002Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021417TCONS_00021417Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010795Prenylcys_lyase
IPR023753FAD/NAD-binding_dom
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0030328prenylcysteine catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016670oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0030328 prenylcysteine catabolic process
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010795Prenylcysteine lyasePFAMPF07156Prenylcys_lyasecoord: 1..235
e-value: 9.5E-57
score: 192.6
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 186..235
coord: 2..88

Blast
[Close]
BLAST of TCONS_00021417-protein vs. Swiss-Prot (Human)
Match: PCYOX (Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.326e-25
Identity = 79/245 (32.24%), Postives = 122/245 (49.80%), Query Frame = 0 
Query:    1 LWNVKGGNEQVPQRLIEESKSTVHYNCKITSIKKLENESSGKAT--YELESDAST-FQSNQYDAVIVSVPLEDPRCFISC----PEIKNWPQPTDLGQFQRCVSSIIQQPINAQYFGVKAASKLPDAITTTCEKAAADFGFIEINKTVHGNRSDPP-------TYRVFSKEPLTEESLRKLFIMEENTAPEISVVDWLAYPHYSPPEKFLPFELDEGVFYVNAIERAASAMEMSAIGGRNAALLA 231
            LW V+GGN+ V   L++ SKS +     +   +K + + +G  T  YE+     T  +S+ YD V+V+ PL      I+     P I+ + Q      +Q  V+++++  +N   F  +   K       T + +      I I  +V   + DP         +++FS+E LT+  + KLF+  +    +     WLAYPHY PPEK     L + ++Y+N IE AASAMEMSAI   NAALLA
Sbjct:  247 LWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYEVVYQIGTETRSDFYDIVLVATPLNRKMSNITFLNFDPPIEEFHQ-----YYQHIVTTLVKGELNTSIFSSRPIDKFGLNTVLTTDNSDLFINSIGIVPSVR-EKEDPEPSTDGTYVWKIFSQETLTKAQILKLFLSYDYAVKK----PWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALLA 481
The following BLAST results are available for this feature:
BLAST of TCONS_00021417-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PCYOX2.326e-2532.24Prenylcysteine oxidase 1 OS=Homo sapiens GN=PCYOX1... [more]
back to top