TCONS_00021611-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00021611-protein
Unique Name	TCONS_00021611-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	925

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00021611-protein ID=TCONS_00021611-protein|Name=TCONS_00021611-protein|organism=Clytia hemisphaerica|type=polypeptide|length=925bp
KIKIVTMSRNGILKTPKRKTTPQTKHQDPIEVFCRVRPPNDECEETCVEI
FNDGNLQLNAPKTLKTQSKIEQIQCTFNKVFTESVSQSELFDNVGLPLVE
DLLNGKNGLCFMYGITGSGKTHTMNGTPTDGGVLPRCLDVVFNSIGQLQT
SRCIFKPDGYNGFDILADVDAKDEAQRQQRELEVQQRNMRNRMDNNDMMR
IPDSTCLEIDEDNNYGVFISFVEVYNNSIFDLLDDSCIDPIKNRTPSSKI
LREDQRRNMFVYDSTEVEVKSTEEAFDLFWKGQNRRKTALTMLNAESSRS
HCVFTIRLVQAPLGPNGDSIMKDRNLIGISQLSLCDLAGSERTSRTKADG
DRIRQAGHINNSLMTLRSCIETLRENQKSQESGGNSKMVPYRDSKLTHLY
KNYFDGDGKVRMIVCLNPSAADFDESVHVVKFAEMTQEVKVARSEGVKFD
LGLTPGRGKASKMFKNVVEDVSDGLSSDLGSQEDLMRTVQQFASWPLLEL
SSFNDATTLPNLLQYLEERIKLRRTLFTDWKQRQDEVRQMILQLEQDNID
LTKALDDQRSVLADRERETKQFEKKIRILNEKCDTLQRSSQTYETQKRQV
EVELEKQRELVHKERTEKMRLKQALRDLTSSERLRYEKEMDKRVKQTQME
MEGHIFEKSEKLRQLRNVVQHLDVPAENQGKVKKSIREEAPLRAYPQTPA
SAPHPAVHKSSRRPPIANKPLHTRTKTTTNATPHGKKKVRSRSPPPSAGR
NKDIAPVRAKHRRSRSSDYWLEHKPTETLATNTVMQPNLKNKKTVDMPKV
KDFKHIWNMPSTPNYILTHQEEDSSGEIETKLIKGEVMKTRGGGTSVQFT
DIETLKKTLEAKGGIPSTPKPPKTNTKTKKRKSEGEDEGASDDSWTSVET
RCAVGIEGRPGTSPGLTHHAKKSKH

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012115	XLOC_012115	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00021611	TCONS_00021611	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR032384	Kif23_Arf-bd
IPR019821	Kinesin_motor_CS
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 562..624
None	No IPR available	COILS	Coil	Coil	coord: 168..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 859..925
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 693..767
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 331..349 score: 53.9 coord: 105..126 score: 61.29 coord: 389..410 score: 46.44 coord: 291..308 score: 54.35
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 27..445 e-value: 1.1E-115 score: 400.3
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 35..439 e-value: 3.3E-96 score: 322.0
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 21..449 e-value: 3.4E-103 score: 344.5
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 29..439 score: 96.607
IPR032384	Kinesin-like protein Kif23, Arf6-interacting domain	PFAM	PF16540	MKLP1_Arf_bdg	coord: 756..858 e-value: 3.1E-36 score: 123.6
IPR019821	Kinesin motor domain, conserved site	PROSITE	PS00411	KINESIN_MOTOR_1	coord: 330..341
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 20..149 coord: 210..440

Blast

[Close]

BLAST of TCONS_00021611-protein vs. Swiss-Prot (Human)
Match: KIF23 (Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF23 PE=1 SV=3)

HSP 1 Score: 639.417 bits (1648), Expect = 0.000e+0
Identity = 388/986 (39.35%), Postives = 587/986 (59.53%), Query Frame = 0

Query:   14 KTPKRKTT---PQTKHQDPIEVFCRVRP---PNDECEETCVEIFNDGNLQLNAPKT--LKTQSKIEQIQCTFNKVFTESVSQSELFDNVGLPLVEDLLNGKNGLCFMYGITGSGKTHTMNGTPTDGGVLPRCLDVVFNSIGQLQTSRCIFKPDGYNGFDILADVDAKDEAQRQQRELEVQQRNMRNRMDNN--DMMRIPD-STCLEIDEDNNYGVFISFVEVYNNSIFDLLDDSCIDPIKNRTPSSKILREDQRRNMFVYDSTEVEVKSTEEAFDLFWKGQNRRKTALTMLNAESSRSHCVFTIRLVQAPLGPNGDSIMKDRNLIGISQLSLCDLAGSERTSRTKADGDRIRQAGHINNSLMTLRSCIETLRENQKSQESGGNSKMVPYRDSKLTHLYKNYFDGDGKVRMIVCLNPSAADFDESVHVVKFAEMTQEVKVARSEGVKFDLGLTPGRGKASKMFKNVVEDVSDGLSSDLGSQEDLMRTVQQFASWPLLELSSFNDATTLPNLLQYLEERIKLRRTLFTDWKQRQDEVRQMILQLEQDNIDLTK------ALDDQRSVLADRERETKQFEKKIRILNEKCDTLQRSSQTYETQKRQVEVELEKQRELVHKERTEKMRLKQALRDLTSSERLRYEKEMDKRVKQTQMEMEGHIFEKSEKLRQLRNVVQHLDVPAENQGKVKKSIREEAPLRAYPQTPASAPHPAVHKSSRRPPIANKP-LHTRTKTTTNAT-----PHGKKKVRSRSPP---PSAGRNKDIAPVRAKH---RRSRSSDYWLEHK---PT--------ETLATNTVMQPN-------LKNKKTVDM-PKVKDFKHIWNM-------PSTPN-----------------YILTHQEEDSSGEIETKLIKGEVMKTRGGGTSVQFTDIETLKKTLEAKGGIPSTPKPPKTNTKTKKRKSE----GEDEGASDDSWTSVETRCAVGIEGRPGT--SPGLTHHAK 921
            KTP++ T     QT  +DP+ V+CRVRP   P+ EC   C+E+ N+  +QL+ P+   L      ++ Q +F +VF    +Q ELFD V  PLV DL++GKNGL F YG+TGSGKTHTM G+P +GG+LPRCLD++FNSIG  Q  R +FK +  N  DI  +VDA  E Q+++     +  + + ++D    DM+ + +     E+DED+ YGVF+S++E+YNN I+DLL++   DPIK + P SK+LRED+  NM+V   TEVEVKSTEEAF++FW+GQ +R+ A T LN ESSRSH VF I+LVQAPL  +GD++++++  I ISQLSL DLAGSERT+RT+A+G+R+R+AG+IN SLMTLR+C++ LRENQ      G +KMVPYRDSKLTHL+KNYFDG+GKVRMIVC+NP A D++E++ V++FAE+TQEV+VAR    K   GLTPGR   ++    V    ++ L +D+         +Q F   P  E+   ND  TLP L++ LE+R  LR+ +  ++ ++ +  + ++ +   DN  L+K       L+++  +++ ++ E ++ EKK + L  K + L++++  YE  KR ++ ELE Q + + ++ ++K RL+  L+ + +   +++EKE ++RV   Q+EM+  ++ K EKL+QL+ +V         +   ++  RE+   R+   +P       + + S    + ++P LH R+ + ++ +        ++K+ + + P    S  R +   P ++K       R   YW E +   PT        E      + QP+       L+++++     +  D K   NM       P  P+                 Y+LTHQE  S GEIETKLIKG++ KTRGGG SVQFTDIETLK+  E+  G             ++KR+S      + +GA +  WT VETRC+V +E R G+   PG  HHA+
Sbjct:    7 KTPRKPTVKKGSQTNLKDPVGVYCRVRPLGFPDQEC---CIEVINNTTVQLHTPEGYRLNRNGDYKETQYSFKQVFGTHTTQKELFDVVANPLVNDLIHGKNGLLFTYGVTGSGKTHTMTGSPGEGGLLPRCLDMIFNSIGSFQAKRYVFKSNDRNSMDIQCEVDALLERQKREAMPNPKTSSSKRQVDPEFADMITVQEFCKAEEVDEDSVYGVFVSYIEIYNNYIYDLLEEVPFDPIKPKPPQSKLLREDKNHNMYVAGCTEVEVKSTEEAFEVFWRGQKKRRIANTHLNRESSRSHSVFNIKLVQAPLDADGDNVLQEKEQITISQLSLVDLAGSERTNRTRAEGNRLREAGNINQSLMTLRTCMDVLRENQMY----GTNKMVPYRDSKLTHLFKNYFDGEGKVRMIVCVNPKAEDYEENLQVMRFAEVTQEVEVARPVD-KAICGLTPGRRYRNQPRGPV---GNEPLVTDV--------VLQSFPPLPSCEILDINDEQTLPRLIEALEKRHNLRQMMIDEFNKQSNAFKALLQEF--DNAVLSKENHMQGKLNEKEKMISGQKLEIERLEKKNKTLEYKIEILEKTTTIYEEDKRNLQQELETQNQKLQRQFSDKRRLEARLQGMVTETTMKWEKECERRVAAKQLEMQNKLWVKDEKLKQLKAIVTEPKTEKPERPSRERD-REKVTQRSVSPSPVPLSSNYIAQISNGQQLMSQPQLHRRSNSCSSISVASCISEWEQKIPTYNTPLKVTSIARRRQQEPGQSKTCIVSDRRRGMYWTEGREVVPTFRNEIEIEEDHCGRLLFQPDQNAPPIRLRHRRSRSAGDRWVDHKPASNMQTETVMQPHVPHAITVSVANEKALAKCEKYMLTHQELASDGEIETKLIKGDIYKTRGGGQSVQFTDIETLKQ--ESPNG-------------SRKRRSSTVAPAQPDGA-ESEWTDVETRCSVAVEMRAGSQLGPGYQHHAQ 954

The following BLAST results are available for this feature:

BLAST of TCONS_00021611-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00021611-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KIF23	0.000e+0	39.35	Kinesin-like protein KIF23 OS=Homo sapiens GN=KIF2...	[more]

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TCONS_00021611-protein (polypeptide) - C. hemisphaerica