TCONS_00021895-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021895-protein
Unique NameTCONS_00021895-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length228

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021895-protein ID=TCONS_00021895-protein|Name=TCONS_00021895-protein|organism=Clytia hemisphaerica|type=polypeptide|length=228bp
RNRYTNCDKFKAYCKYHSSFEIFCPITCDKCKIETKDVPSYITGGYGLDR
FTITEEQRKVISDSCLAAHNAKRALHINTPPLQYNDALAERAQWYAEYLE
LQNEWEHDPCMSFGHGSTHIGENLYKMTLDLKRHGWEAADMAKQIEVAIQ
LWYDEIENYDFTTGQMKDEYGVVIGHLTQLLWDTTAEVGCGVVTGPSGTF
VVARYSPGGNISGRYTQHVHPLIKEENH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012285XLOC_012285Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021895TCONS_00021895Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001283Allrgn_V5/Tpx1
IPR014044CAP_domain
IPR003582ShKT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 148..161
score: 36.39
coord: 174..190
score: 47.99
coord: 82..100
score: 29.36
coord: 200..213
score: 41.73
IPR014044CAP domainSMARTSM00198SCP_3coord: 60..213
e-value: 3.1E-26
score: 103.2
IPR014044CAP domainGENE3D3.40.33.10coord: 53..224
e-value: 4.1E-34
score: 117.4
IPR014044CAP domainPFAMPF00188CAPcoord: 66..203
e-value: 2.6E-17
score: 63.7
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 63..218
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 1..31
score: 8.74

Blast
[Close]
BLAST of TCONS_00021895-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 1.382e-16
Identity = 57/169 (33.73%), Postives = 77/169 (45.56%), Query Frame = 0 
Query:   59 KVISDSCLAAHNAKRALHINTPPLQYNDALAERAQWYAEYLELQNEWEHDPCMSFGHGSTHIGENLYKMTLDLKRHGWEAADMAKQIEVAIQLWYDEIENYDFTTGQMKDEYGVVIGHLTQLLWDTTAEVGCGVVTGPSG-TFVVARYSPGGNI--SGRYTQHVHPLIK 224
            K   +  L AHN  R  H   PPL+    L   AQ Y+E L      +H P  S G      GENL   + D  + G E AD           WY EI+NY+F     +  +    GH T ++W  T ++G G  +   G +FVVARY P GN+   G + ++V P  K
Sbjct:    7 KQFHNEVLKAHNEYRQKH-GVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQ----CGENLAWASYD--QTGKEVADR----------WYSEIKNYNF----QQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPKK 154
The following BLAST results are available for this feature:
BLAST of TCONS_00021895-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR11.382e-1633.73Golgi-associated plant pathogenesis-related protei... [more]
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