TCONS_00022191-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022191-protein
Unique NameTCONS_00022191-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length170

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022191-protein ID=TCONS_00022191-protein|Name=TCONS_00022191-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
SLCHNEKMAEDPRIDTSRIDPKPQSISEAYAVPANFLEIDVCSPQTHGVG
KKRYTDYEVRMKTNIPIFKQKESSVRRRYSDFEWVRSELERDSKIVVPSL
PGKALKKMLPFRADDGIFEDEFIEERRQGLEGFINRVAGHPLAQNERCLH
IFLQEAIIDKNYVPGKIRNV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012449XLOC_012449Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022191TCONS_00022191Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 34..156
e-value: 1.4E-25
score: 101.0
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 23..170
e-value: 4.9E-26
score: 90.6
IPR001683Phox homologous domainPFAMPF00787PXcoord: 35..155
e-value: 1.6E-26
score: 92.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 35..159
score: 17.481
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 34..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableCDDcd06894PX_SNX3_likecoord: 36..158
e-value: 1.28809E-82
score: 241.594

Blast
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BLAST of TCONS_00022191-protein vs. Swiss-Prot (Human)
Match: SNX12 (Sorting nexin-12 OS=Homo sapiens GN=SNX12 PE=1 SV=3)

HSP 1 Score: 248.054 bits (632), Expect = 2.761e-85
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 0 
Query:    8 MAEDPRIDTSRIDPKPQSISEAYAVPANFLEIDVCSPQTHGVGKKRYTDYEVRMKTNIPIFKQKESSVRRRYSDFEWVRSELERDSKIVVPSLPGKALKKMLPFRADDGIFEDEFIEERRQGLEGFINRVAGHPLAQNERCLHIFLQEAIIDKNYVPGK 166
            M++    DT R++ KPQ +++AY  P+NFLEID+ +PQT GVG+ R+T YEVRM+TN+PIFK KES VRRRYSDFEW+++ELERDSKIVVP LPGKALK+ LPFR D+GIFE+ FIEERRQGLE FIN++AGHPLAQNERCLH+FLQE  ID+NYVPGK
Sbjct:    1 MSDTAVADTRRLNSKPQDLTDAYGPPSNFLEIDIFNPQTVGVGRARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEEAIDRNYVPGK 159
The following BLAST results are available for this feature:
BLAST of TCONS_00022191-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX122.761e-8571.07Sorting nexin-12 OS=Homo sapiens GN=SNX12 PE=1 SV=... [more]
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