TCONS_00022326-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022326-protein
Unique NameTCONS_00022326-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length662

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022326-protein ID=TCONS_00022326-protein|Name=TCONS_00022326-protein|organism=Clytia hemisphaerica|type=polypeptide|length=662bp
MRVVALISGGKDSCFNMMHCVYQGHEIVALANLQPEEKDEMDSYMYQTVG
HDVIDAYSEALGLPLYRRVIRGRSVNVQEDYQVVAEDEVEDLFQLLKKIK
EEIDFEGVSSGAILSNYQRVRVEHVCNRLELKSLAYLWQRNQDELLDEMI
AAEVTAILIKVASLGLKPCHLGQTLHEMRQSLHRMKKECFLNVCGEGGEY
ETLVLDCPLFIKTIVIDESTVVTHEESNDVLTVAYKTFQKFHLREKLNVN
SNMTLRERMKGVTIATPPLLNVHVPQLCSNDQQEKDNADVICTRTDVPKS
KDCCFSFRSNKTVGWVSGIVCPVQEDKTLEESTLQVLNTFKEKLEEHCGG
QDENNPINCLVHLFVRNMDDFARINNVYKRFFKAKPPARVCVKVELPPNE
HFRMDTHLVNQSQRQVHYVQGISYWAPANIGPYSQAVKCTIGRLKKVFFS
GSIPLQPASMQLLTDDFPREAMLSLKHVHEVAEVFANERHSNVHYGSITC
YVTQYKFMKMAQNIFEHHQDFFPAENYEVGVVCVPRLPRNARIEWHVNMV
IPLQQDEDCSEDEDGQDETEDVVNDVSRYFKNSRVFSLDNPCGVLREVPP
SKDAPFCRLFVAIGDTASRDQEVKEATNMIYEQLKPKTIVSIVPVTYVMD
GALMMLSFDFHS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012520XLOC_012520Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022326TCONS_00022326Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR002761Diphthami_syn_dom
IPR013813Endoribo_LPSP/chorism_mut-like
IPR006175YjgF/YER057c/UK114
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availableGENE3D3.90.1490.10coord: 157..251
e-value: 1.0E-26
score: 92.2
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 1..226
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..155
e-value: 4.0E-32
score: 110.8
IPR002761Diphthamide synthase domainPFAMPF01902Diphthami_syn_2coord: 1..226
e-value: 4.1E-41
score: 140.8
IPR002761Diphthamide synthase domainTIGRFAMTIGR00290TIGR00290coord: 1..233
e-value: 2.3E-63
score: 211.8
IPR002761Diphthamide synthase domainCDDcd01994Alpha_ANH_like_IVcoord: 2..210
e-value: 3.47911E-89
score: 277.566
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeGENE3D3.30.1330.40coord: 411..553
e-value: 3.7E-22
score: 78.3
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeGENE3D3.30.1330.40coord: 304..410
e-value: 1.2E-10
score: 41.1
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeSUPERFAMILY55298YjgF-likecoord: 417..552
IPR013813Endoribonuclease L-PSP/chorismate mutase-likeSUPERFAMILY55298YjgF-likecoord: 315..398
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 326..398
e-value: 8.8E-7
score: 28.9

Blast
[Close]
BLAST of TCONS_00022326-protein vs. Swiss-Prot (Human)
Match: DPH6 (Diphthine--ammonia ligase OS=Homo sapiens GN=DPH6 PE=1 SV=3)

HSP 1 Score: 300.442 bits (768), Expect = 1.502e-97
Identity = 148/253 (58.50%), Postives = 191/253 (75.49%), Query Frame = 0 
Query:    1 MRVVALISGGKDSCFNMMHCVYQGHEIVALANLQPEE----KDEMDSYMYQTVGHDVIDAYSEALGLPLYRRVIRGRSVNVQEDYQVVAEDEVEDLFQLLKKIKEEIDFEGVSSGAILSNYQRVRVEHVCNRLELKSLAYLWQRNQDELLDEMIAAEVTAILIKVASLGLKP-CHLGQTLHEMRQSLHRMKKECFLNVCGEGGEYETLVLDCPLFIKTIVIDESTVVTHEESNDVLTVAYKTFQKFHLREKLN 248
            MRV ALISGGKDSC+NMM C+  GH+IVALANL+P E     DE+DSYMYQTVGH  ID Y+EA+ LPLYRR IRGRS++ ++ Y     DEVEDL++LLK +KE+ + EG+S GAILS+YQR+RVE+VC RL L+ LAYLWQRNQ++LL EMI++ + A++IKVA+LGL P  HLG+TL +M   L  + K+  ++VCGEGGEYET  LDCPLF K I++D S VV H  ++    VAY  F + HL +K++
Sbjct:    1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTLDQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIH-SADAFAPVAYLRFLELHLEDKVS 252
The following BLAST results are available for this feature:
BLAST of TCONS_00022326-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPH61.502e-9758.50Diphthine--ammonia ligase OS=Homo sapiens GN=DPH6 ... [more]
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