TCONS_00022340-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022340-protein
Unique NameTCONS_00022340-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022340-protein ID=TCONS_00022340-protein|Name=TCONS_00022340-protein|organism=Clytia hemisphaerica|type=polypeptide|length=144bp
MKQEQDAAYHESLAADRAKVQAEKERHSEEMEKMRQEQEVQDMREAERAS
CEEQLPDEPPSSAKNTTNIRFRFPNGETEQRRFYEHQKLNVIFMYVTSKG
FSMNSNEHRIVTNFPRRQLSEDSLQRTLKELKLCPRENLFVEEI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012526XLOC_012526Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022340TCONS_00022340Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001012UBX_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..46
NoneNo IPR availableGENE3D3.10.20.90coord: 5..141
e-value: 5.9E-22
score: 77.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
IPR001012UBX domainSMARTSM00166ubx_3coord: 59..143
e-value: 3.2E-13
score: 59.9
IPR001012UBX domainPFAMPF00789UBXcoord: 62..143
e-value: 1.4E-20
score: 73.2
IPR001012UBX domainPROSITEPS50033UBXcoord: 62..141
score: 19.113
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 25..143

Blast
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BLAST of TCONS_00022340-protein vs. Swiss-Prot (Human)
Match: FAF1 (FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.497e-26
Identity = 61/145 (42.07%), Postives = 96/145 (66.21%), Query Frame = 0 
Query:    1 MKQEQDAAYHESLAADRAKVQAEKERHSEE--MEKMRQEQEVQDMREAERASCEEQLPDEPP-SSAKNTTNIRFRFPNGETEQRRFYEHQKLNVIFMYVTSKGFSMNSNEHRIVTNFPRRQLSEDSLQRTLKELKLCPRENLFVE 142
            +K+EQD AY  SL ADRAK +A +   +E+  +E++R+EQE +  REA R S E+ LP EP   +A+  + +R R P+GE  +RRF    KL ++F +V SKGF    +E+++++ FPRR +++    ++L E+KL P+E LF+E
Sbjct:  507 VKREQDEAYRLSLEADRAKREAHEREMAEQFRLEQIRKEQEEE--REAIRLSLEQALPPEPKEENAEPVSKLRIRTPSGEFLERRFLASNKLQIVFDFVASKGFPW--DEYKLLSTFPRRDVTQLDPNKSLLEVKLFPQETLFLE 647
The following BLAST results are available for this feature:
BLAST of TCONS_00022340-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FAF15.497e-2642.07FAS-associated factor 1 OS=Homo sapiens GN=FAF1 PE... [more]
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