TCONS_00022349-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022349-protein
Unique NameTCONS_00022349-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length167

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022349-protein ID=TCONS_00022349-protein|Name=TCONS_00022349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=167bp
MTGPEVIINHRKKKGKMEYLVKWRNKPMTQNTWVPKNKLDSSFVQPYTDK
TRYSVNNINLTTPRRHMQNVRGTAIIWLMLLNWVTKSEAMQLGPIYDCTR
VKPTGIYRFPDIRNCTVPPDDETRRVQTFKAEVLHESPKYTLATLFHCSK
FEATLTCKEGFLGGKRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012534XLOC_012534Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022349TCONS_00022349Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromodomain-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 1..52
e-value: 6.6E-8
score: 42.3
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 2..39
score: 11.526
IPR023780Chromo domainPFAMPF00385Chromocoord: 5..43
e-value: 3.2E-10
score: 39.7
NoneNo IPR availableGENE3D2.40.50.40coord: 2..131
e-value: 2.3E-12
score: 46.1
NoneNo IPR availableCDDcd00024CHROMOcoord: 4..35
e-value: 3.79418E-8
score: 45.7179
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 4..50

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022349-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top