TCONS_00022627-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022627-protein
Unique NameTCONS_00022627-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length393

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022627-protein ID=TCONS_00022627-protein|Name=TCONS_00022627-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
MESDKDLVSVELEPEKKGLVLKHRMYTVTSTLHKANVQRRYNDFIAFHEV
LLLRYPYRLVPRLPPKKIVANTEFIEGRRRALKRFLVLILRHPAIGKDPI
VNYFLTFKGSDAGHKLKEQYKGVPDEFMTNEMASSAKDNVPADTQASLTS
SRQQLYFIHKHIEQMKDILERLGGRSTAYAVDMLSFSKNLQALSEESNPV
TEWATGGNKTWQKLQRGFKSLVVPFASIAEKSAMHSTHETEGVSDYLEMF
MDITAAYKELVERHEKGVLRDHHMALHKMQQYKQRQMSTAMKGNENMDQL
EHRIIAQEGAISNMENRNYFSLYCLQEETRFIHSNMNMVVKMFQNLVDIE
IRKHTELCTLWDDMRQPINHLAESANTPGSPVSPDTSSKSFFG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012706XLOC_012706Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022627TCONS_00022627Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
Vocabulary: Molecular Function
TermDefinition
GO:0035091phosphatidylinositol binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0035091 phosphatidylinositol binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableGENE3D1.20.1270.60coord: 149..370
e-value: 2.1E-10
score: 40.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..393
NoneNo IPR availableCDDcd07597BAR_SNX8coord: 125..361
e-value: 1.06424E-65
score: 210.625
NoneNo IPR availableCDDcd06866PX_SNX8_Mvp1p_likecoord: 6..107
e-value: 2.05553E-47
score: 157.775
IPR001683Phox homologous domainSMARTSM00312PX_2coord: 1..108
e-value: 1.8E-16
score: 70.7
IPR001683Phox homologous domainPFAMPF00787PXcoord: 11..107
e-value: 1.3E-18
score: 66.9
IPR001683Phox homologous domainGENE3D3.30.1520.10coord: 8..125
e-value: 1.0E-22
score: 79.9
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 4..112
score: 17.393
IPR001683Phox homologous domainSUPERFAMILY64268PX domaincoord: 16..108

Blast
[Close]
BLAST of TCONS_00022627-protein vs. Swiss-Prot (Human)
Match: SNX8 (Sorting nexin-8 OS=Homo sapiens GN=SNX8 PE=1 SV=1)

HSP 1 Score: 335.495 bits (859), Expect = 5.129e-112
Identity = 172/385 (44.68%), Postives = 244/385 (63.38%), Query Frame = 0 
Query:    5 KDLVSVELEPEKKGLVLKHRMYTVTSTLHKANVQRRYNDFIAFHEVLLLRYPYRLVPRLPPKKIV-ANTEFIEGRRRALKRFLVLILRHPAIGKDPIVNYFLTFKGSDAGHKLKEQYKGVPDEFMTNEMASSAKDNVPADTQASLTSSRQQLYFIHKHIEQMKDILERLGGRSTAYAVDMLSFSKNLQALSEESNPVTEWATGGNKTWQKLQRGFKSLVVPFASIAEKSAMHSTHETEGVSDYLEMFMDITAAYKELVERHEKGVLRDHHMALHKMQQYKQRQMSTAMKGN---ENMDQLEHRIIAQEGAISNMENRNYFSLYCLQEETRFIHSNMNMVVKMFQNLVDIEIRKHTELCTLWDDMRQPINHL-AESANTPGSPVSP 384
            +D V VEL PEKKGL LKH  Y V+S   K++V RRYNDF+ F E+LL ++PYR+VP LPPK+++ A+ EFIE RRRALKRF+ L+ RHP   +D ++  FL+F GSD  +KLKE  + V DEF+  ++A+ AKD +PAD QA    SR+ +  I+    +++D  ER+  R+   A D+L F K L A+  ++ P+  WA   + TW  L++  K L V FA +A+K+A     E   V + L +F+D+  +YK+L ERHEKGVL  H  ALHK    K RQM +A   N   E+++QLE RI+ QE AI  ME RNYFSLYCL +ET+ IH  + +   + +  V+ +I+ H E+  +W+D+R  ++ L A   +T   P SP
Sbjct:   74 RDTVQVELIPEKKGLFLKHVEYEVSSQRFKSSVYRRYNDFVVFQEMLLHKFPYRMVPALPPKRMLGADREFIEARRRALKRFVNLVARHPLFSEDVVLKLFLSFSGSDVQNKLKESAQCVGDEFLNCKLATRAKDFLPADIQAQFAISRELIRNIYNSFHKLRDRAERIASRAIDNAADLLIFGKELSAIGSDTTPLPSWAALNSSTWGSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLLQSYKDLCERHEKGVLHKHQRALHKYSLMK-RQMMSATAQNREPESVEQLESRIVEQENAIQTMELRNYFSLYCLHQETQLIHVYLPLTSHILRAFVNSQIQGHKEMSKVWNDLRPKLSCLFAGPHSTLTPPCSP 457
The following BLAST results are available for this feature:
BLAST of TCONS_00022627-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SNX85.129e-11244.68Sorting nexin-8 OS=Homo sapiens GN=SNX8 PE=1 SV=1[more]
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