TCONS_00022735-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00022735-protein
Unique NameTCONS_00022735-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length895

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00022735-protein ID=TCONS_00022735-protein|Name=TCONS_00022735-protein|organism=Clytia hemisphaerica|type=polypeptide|length=895bp
LDPDCAGRPAGNYAVDNFCNAFYTCDANQRELSFTSCGSGEYYNPTLSGC
STNYPTGCQHKFCTERSNNVAGIFSFTGSSCSNSYVSCSGTSTAVPNLLT
FSLSCPPNQYFRVSNSATSAGSCVNVDGNTPISPLCPNYQCIGRQNGYTF
ALSTTVAHDCRKYYICNDQQLSEQQCPTASPYYNPNTKTCDSVPSALCWH
PDCISGTVPRDYAITANSQCFSSFYRCDANRQRSSQSCGLSFLGGYYGID
AVTNTWRCISGIAPSTCPNYLCIGRTGSASSVSTPMYRNPNDLYCTGYVS
CSFSGVQSFLTCPNGGFLDYSGYQCVSARPLDQACRVDGGLSLWGAWQYV
AGTSCSAACGNDGVQQMIRTRACNNPAPLNGGSTCGNAALTETKNDVCQT
TPPPCGDQFCIGRAAGDYSRTLKDLVNSPNIACFNGYLRCSGAPLNTLEV
RTCPSGSIWSPSSTSSNTGACITRPNTLDARCPVCAGIFSGSVPFSTLLT
TYDCRSYYSCNNEAHSLVNCPQDTTTFGSNDPRPTYYNPNTKLCERIPVA
TCSPVQGYWSSWTYAASSSCSVDNNFQCSETQTRLCNSPSPVPSNDPNRQ
CPGLPTQRVPCRAGASGCGDAFCQSRIAGNYSKTLELSTPTNLGCYKEYI
TCSGPPSNTKTYEKCILNDQIYFPEKGRCFRDDPDPNCPNVGCAGKADGD
HPFSNDLHDCRQFYTCLNEQPTLNTCPTDAQNRSSYYDGFFEKKCVNLPQ
DLVRRTCNYIQGWWSTWAPAQTCSRNGANQCVRSRTRSCNNPSPKNDPFP
CGYSVANLRDESDTIACLESECAQPCQGITCPASSTCVNVGVSYQCQCNA
GYQLISGNQLTVVCQDINECANSPYPCLSTQRCTNIQGSYQCLSG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012768XLOC_012768Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00022735TCONS_00022735Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002557Chitin-bd_dom
IPR000884TSP1_rpt
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR018097EGF_Ca-bd_CS
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0006030chitin metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008061chitin binding
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006030 chitin metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0008061 chitin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002557Chitin binding domainSMARTSM00494chi_10coord: 686..759
e-value: 15.0
score: 6.2
coord: 3..60
e-value: 3.8E-6
score: 36.4
coord: 61..125
e-value: 20.0
score: 4.5
coord: 134..205
e-value: 3.9
score: 13.2
coord: 483..554
e-value: 20.0
score: 4.4
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 2..72
e-value: 4.1E-6
score: 26.1
coord: 122..203
e-value: 4.1E-4
score: 19.7
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 5..58
e-value: 4.1E-5
score: 23.6
coord: 141..193
e-value: 1.8E-6
score: 27.9
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 138..200
score: 10.475
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 2..60
score: 10.792
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 64..123
score: 6.797
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 269..337
score: 8.877
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 486..554
score: 6.619
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 620..688
score: 6.733
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 407..484
score: 8.256
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 690..759
score: 8.497
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 3..65
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 156..207
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 341..406
e-value: 0.087
score: 18.7
coord: 764..823
e-value: 0.12
score: 17.6
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 335..405
e-value: 2.9E-5
score: 23.9
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 338..399
score: 8.417
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 553..619
score: 8.443
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 335..394
IPR000742EGF-like domainSMARTSM00181egf_5coord: 825..865
e-value: 0.0046
score: 26.2
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 821..865
e-value: 0.04
score: 13.1
coord: 866..892
e-value: 0.12
score: 9.4
IPR001881EGF-like calcium-binding domainPFAMPF07645EGF_CAcoord: 866..893
e-value: 1.2E-6
score: 28.5
coord: 821..857
e-value: 2.6E-4
score: 21.0
NoneNo IPR availableGENE3D2.10.25.10coord: 846..869
e-value: 1.2E-9
score: 37.4
NoneNo IPR availableGENE3D2.10.25.10coord: 870..894
e-value: 4.4E-7
score: 29.7
NoneNo IPR availableGENE3D2.40.490.10coord: 802..845
e-value: 0.0033
score: 16.9
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 825..888
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 866..892

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00022735-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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