TCONS_00023449-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00023449-protein
Unique Name	TCONS_00023449-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	643

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00023449-protein ID=TCONS_00023449-protein|Name=TCONS_00023449-protein|organism=Clytia hemisphaerica|type=polypeptide|length=643bp
MEEDDETRDKLLTSVVHMMESNGTAHPHPHPHQDSKTNPAFHFTNGDMTM
SESNKNFNNNGVHKPRKFSLPTGNSYPAKAPLDRMASVASSQFTTANSVL
RLVSDDRVDGHTKPKTWFAFCKRKWPWILLYFSVVGIIVALTTMYVLEKR
NNDFTAAIMEGKEIKEPCFEREYARHIPNVKREAEIIKAIIKSKLLINRQ
FDGKTTQAYTIDVNYMGKEIWSDKQNANFSSKFPIASLTKIFPVLMLHML
IADGTIKSIDDDVTKYEPLFDYKNPFNRKRITFRHLACMMSGLPREAPCL
NFTMTNFCPISDEEMYKRVRNITLSTHPGHIPAYSNLAFGILGSVLERLK
NTTSSQWIMDNIINPLNMTETGFDILERRREFPESIVDGKLVDIVNWGWL
TPTGGLYSSSNDLAKLGLLFTGNKTLPGLSKETIQRMLTPEYIWADGEAQ
GCPFEINKVDTELKKKIDYLVYSKDGSIFGYGAKFSIVRELQLNINVLAA
HVDGSTNHIWYDVTKIFVKAFDDLLKRKGDNYRLPANPERFVGSYKLTSY
WPIIKSPCNITLEDGMLFLNLEWMKAPLTGTDNPLMLKTGNYQKLVNNHA
CVLLGLGLLRMEFHFDPAIDDSLPGFYVNGISFYGYVSFERIK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013193	XLOC_013193	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00023449	TCONS_00023449	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001466	Beta-lactam-related
IPR012338	Beta-lactam/transpept-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.710.10		coord: 191..532 e-value: 1.0E-49 score: 169.1
IPR001466	Beta-lactamase-related	PFAM	PF00144	Beta-lactamase	coord: 227..498 e-value: 1.5E-31 score: 109.7
IPR012338	Beta-lactamase/transpeptidase-like	SUPERFAMILY	56601	beta-lactamase/transpeptidase-like	coord: 221..524

Blast

[Close]

BLAST of TCONS_00023449-protein vs. Swiss-Prot (Human)
Match: BLML (Putative beta-lactamase-like 1 OS=Homo sapiens GN=LACTBL1 PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 6.366e-30
Identity = 88/286 (30.77%), Postives = 134/286 (46.85%), Query Frame = 0

Query:  217 GKEIWSDKQNA--NFSSKFPIASLTKIFPVLMLHMLIADGTIKSIDDDVTKYEPLFDYKNPFN-----RKRITFRHLACMMSGLPREAPCLNFTMTNFCPISDEEMYKRVRNITLSTHPGHIPAYSNLAFGILGSVLERLKNTTSSQ-WIMDNIINPLNMTETGFDILE--RRREFPESIVDGKLVDIVNWGWLTPTGGLYSSSNDLAKLGLLFTGNKTLPGLSKETIQRMLTPEYIWADGEAQGCP--FEINKVDT--ELKKKIDYLVYSKDGSIFGYGAKFSIV 488
            GK+  SD  +   N  + + I+S++KIFPVLML+ L  +G + S+DD + +Y   F   NP       ++ +  R +A  +SGLPR     +         S +E    +++  L   PG    YS LAF +L  VL         Q W+ +N++ PL M +TGFD+    R R        G+   + + GW  P+G +YS++ DLAKL +   G      L  +  + +L P           CP  +  N+  T  E   +  Y V  KDG + GY A FS+V
Sbjct:   58 GKKNGSDPASGAPNEYTMYRISSISKIFPVLMLYRLWEEGIVASLDDPLERYASTFTINNPLGLASAEQQGLILRRMASQLSGLPRRLRSTSLLWKG----STQEALNLLKDDVLVVDPGTRCHYSTLAFSLLAHVLAAHTAQGDYQRWVSENVLEPLGMADTGFDLTPDVRARLAAGFYGSGRPAPLYDLGWYRPSGQMYSTAADLAKLAVALLGGGPRRLLRPDAAKTLLAPLL--------ACPGAYFANETGTPWEFHAQRGYRVVRKDGDLDGYAATFSLV 331

The following BLAST results are available for this feature:

BLAST of TCONS_00023449-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00023449-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BLML	6.366e-30	30.77	Putative beta-lactamase-like 1 OS=Homo sapiens GN=...	[more]

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TCONS_00023449-protein (polypeptide) - C. hemisphaerica