TCONS_00023488-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023488-protein
Unique NameTCONS_00023488-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length403

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023488-protein ID=TCONS_00023488-protein|Name=TCONS_00023488-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MVTMIIQIFFMVLLTYQCQLATSATIMYDKVYEITLYTGHESWAGTNAGV
WIKIFGNAGHSEWKKLPDDKKYYEKGSIDKFDVTFDANYGQINKIQVGQD
SDGMYADWKLEEVRVRHYNSLKTSRFVVRKWLKKQYGVSTRHIEATREEK
VNCGRAPAQPRVVMGDTSAKSQWPWQAQIRKTSNEHHCGGTLIHPEWVLS
ASHCYFNDQSKDNYIITLGEHNRYQHERSEQTFRVKKMLIHPNYNPDKIN
NDLTLLQLDRPVLITPDVQLACLPAPGYQLPPGEDCFVSGWGDEYVGSGT
PVVLKHARLPSVSNKECYTNMKHINKVTDQMVCGGGNNRGGCFGDSGGPY
VCLNQAGQFVVQGAVSWGVSDCKASEFFTVFARVGNFVSWIEENIYSKYI
SDF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013205XLOC_013205Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023488TCONS_00023488Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR001024PLAT/LH2_dom
IPR033116TRYPSIN_SER
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0005515 protein binding
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 189..204
score: 55.0
coord: 339..351
score: 56.77
coord: 248..262
score: 35.16
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 161..391
e-value: 9.6E-76
score: 267.6
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 163..391
e-value: 1.4E-61
score: 208.0
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 162..396
score: 33.576
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 162..394
e-value: 2.21718E-75
score: 235.634
IPR001024PLAT/LH2 domainPFAMPF01477PLATcoord: 32..134
e-value: 7.0E-15
score: 55.5
IPR001024PLAT/LH2 domainGENE3D2.60.60.20coord: 19..142
e-value: 5.2E-27
score: 93.7
IPR001024PLAT/LH2 domainPROSITEPS50095PLATcoord: 30..146
score: 30.419
IPR001024PLAT/LH2 domainSUPERFAMILY49723Lipase/lipooxygenase domain (PLAT/LH2 domain)coord: 30..137
NoneNo IPR availableGENE3D2.40.10.10coord: 162..192
e-value: 6.0E-16
score: 57.8
NoneNo IPR availableGENE3D2.40.10.10coord: 269..398
e-value: 4.6E-35
score: 120.3
NoneNo IPR availableGENE3D2.40.10.10coord: 193..268
e-value: 7.2E-30
score: 102.4
IPR033116Serine proteases, trypsin family, serine active sitePROSITEPS00135TRYPSIN_SERcoord: 340..351
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 199..204
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 145..395

Blast
[Close]
BLAST of TCONS_00023488-protein vs. Swiss-Prot (Human)
Match: CEL2A (Chymotrypsin-like elastase family member 2A OS=Homo sapiens GN=CELA2A PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.567e-47
Identity = 96/268 (35.82%), Postives = 136/268 (50.75%), Query Frame = 0 
Query:  138 VSTRHIEATREEKVNCGRAPAQP---RVVMGDTSAKSQWPWQAQIRKTSNE---HHCGGTLIHPEWVLSASHCYFNDQSKDNYIITLGEHNRYQHERSEQTFRVKKMLIHPNYNPDKIN--NDLTLLQLDRPVLITPDVQLACLPAPGYQLPPGEDCFVSGWGDEYVGSGTPVVLKHARLPSVSNKECYTNMKHINKVTDQMVCGGGNNR-GGCFGDSGGPYVCLNQAGQFVVQGAVSWGVS-DCKASEFFTVFARVGNFVSWIEENI 395
            + T  +       ++CG     P   RVV G+ +  + WPWQ  ++ +SN    H CGG+LI   WVL+A+HC     S   Y + LG HN Y  E       V K+++H ++N ++I+  ND+ LL+L  PV +T  +QLACLP  G  LP    C+V+GWG        P VL+  RL  V    C ++    + V   M+C GG+     C GDSGGP  C    G++ V G VS+G    C      +VF RV N++ WI   I
Sbjct:    2 IRTLLLSTLVAGALSCGDPTYPPYVTRVVGGEEARPNSWPWQVSLQYSSNGKWYHTCGGSLIANSWVLTAAHCI---SSSRTYRVGLGRHNLYVAESGSLAVSVSKIVVHKDWNSNQISKGNDIALLKLANPVSLTDKIQLACLPPAGTILPNNYPCYVTGWGRLQTNGAVPDVLQQGRLLVVDYATCSSSAWWGSSVKTSMICAGGDGVISSCNGDSGGPLNCQASDGRWQVHGIVSFGSRLGCNYYHKPSVFTRVSNYIDWINSVI 266
The following BLAST results are available for this feature:
BLAST of TCONS_00023488-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CEL2A1.567e-4735.82Chymotrypsin-like elastase family member 2A OS=Hom... [more]
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