TCONS_00023565-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023565-protein
Unique NameTCONS_00023565-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023565-protein ID=TCONS_00023565-protein|Name=TCONS_00023565-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MMLXYVPIAVQKGKDLIKNFPEMMKELGKYLKDKICDNTILCDDAQLSDE
QFMFVDQVGIFDWDLIKQKIKEYIEIKYPGLQDKVKQRVLDIISKATSVR
DLLWKAAQEIVMVGGEHAATIKQILKDLVANIKSIVNPQTTYDAVAEDEI
ALFDYDLIKQKIKEYIEIKYPGLQDKVKQKVLDVVNRATNVADLVKESFK
EIWQVGGEHAAFVKQILKDLIANIKNIVSPSVPQISYDAVSRLQALKDKI
MKYIEAKYPKLTADIKAKIQNIFDKATNIGQIIANAISELLRVHGDNADI
VKQIIRDLIKKVKDELKSGISKRSVDFDELKNKLKEYLENKVPQLQAQIK
EQLKAVIDKAQSKFQLIREFIKTVWQMSKDKKDEVVKVVKELIEQLKNFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013244XLOC_013244Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023565TCONS_00023565Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 382..400
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableGENE3D1.20.120.20coord: 155..246
e-value: 9.8E-4
score: 18.7
coord: 9..147
e-value: 0.049
score: 13.2
NoneNo IPR availableGENE3D1.20.120.20coord: 247..399
e-value: 5.6E-10
score: 38.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 94..396

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023565-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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