TCONS_00023754-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023754-protein
Unique NameTCONS_00023754-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length369

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023754-protein ID=TCONS_00023754-protein|Name=TCONS_00023754-protein|organism=Clytia hemisphaerica|type=polypeptide|length=369bp
SSGMIQTEESNEGQSAPTLMETDVETSLQAPQAYMSQLQSALENQQQPLS
DSNNTEPYMNHDFFASQQQQQQQQTIEYNNILQDINQMYALMSQQPGFQY
QDFANAYYNQFFYNTCQTQMQMLPESGANLSSQYTPFQTIATPIIHQEID
QGRVADLETMTTNVNELLGTVDMTNDLFSNTLLKNCPEKRKGRSKKEDYS
EERLEEVAAACLPDAFDLWKEKYRTLVIEEYPNASRKEVDDRLTEIWCRL
PDMHRRRYFVKAEKLARRYNSTAAFSYMNRFKNKHPAHRYNEPNVPNDSN
RVHCPTPIRTTPKGTPDKTTEHENDSQKSSDSDENSNDSLTNSNDFDYKN
ALKETQTYNSPVKXITKTR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013346XLOC_013346Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023754TCONS_00023754Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 215..271
e-value: 5.3E-6
score: 26.7
IPR009071High mobility group box domainGENE3D1.10.30.10coord: 212..345
e-value: 2.5E-7
score: 30.4
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 214..278
score: 9.263
IPR009071High mobility group box domainSUPERFAMILY47095HMG-boxcoord: 214..271
NoneNo IPR availableCDDcd00084HMG-boxcoord: 215..270
e-value: 2.04919E-4
score: 37.5984

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023754-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top