TCONS_00024078-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024078-protein
Unique NameTCONS_00024078-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length422

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024078-protein ID=TCONS_00024078-protein|Name=TCONS_00024078-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
MLPSVGVFGTDHQAQILIALFKAAGFPVTAICGSTYESAKSLANDLKVAF
HTNKIQELLLHNEVDIVCVAGTPHQYAEVCTKALSIGKHVFSSTPAGLTL
KEANDMLNKAQYYPKLLSVLNHPLRFLSAYSEAKNLIKEGRIGEILICEC
RIHIKSLIGSSFDWHCDSTMGGGVLQTYGSHIVDILSFLLEQKATQAHGI
LETFVKQTDKMPNFRQISSDDFCSFQLKYPSGIRACVTLNAHMPNNFVQE
VMLVGSKGFLKIVNCNLYGQISGSDTVECLYTEEQGDRSLYSSFEDILPG
MYLLGCEQLIEGIKLAFESTQLMGMDQSTDRRNADINLITAAANFENGCY
TRSVLDAIFESNKQRQWVEIKQPGEEFRDNTFWSSKECSLQQSGMNNTDN
RVLKPRTDTQKQRSSPHVSKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013525XLOC_013525Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024078TCONS_00024078Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000683Oxidoreductase_N
IPR004104OxRdtase_C
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000683Oxidoreductase, N-terminalPFAMPF01408GFO_IDH_MocAcoord: 6..119
e-value: 6.6E-11
score: 43.0
NoneNo IPR availableGENE3D3.40.50.720coord: 3..138
e-value: 2.2E-22
score: 79.3
NoneNo IPR availableGENE3D3.30.360.10coord: 139..372
e-value: 4.8E-29
score: 101.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..422
NoneNo IPR availableSUPERFAMILY55347Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domaincoord: 129..269
IPR004104Oxidoreductase, C-terminalPFAMPF02894GFO_IDH_MocA_Ccoord: 134..193
e-value: 1.3E-4
score: 21.8
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 5..142
coord: 170..191

Blast
[Close]
BLAST of TCONS_00024078-protein vs. Swiss-Prot (Human)
Match: GFOD1 (Glucose-fructose oxidoreductase domain-containing protein 1 OS=Homo sapiens GN=GFOD1 PE=1 SV=1)

HSP 1 Score: 293.508 bits (750), Expect = 3.883e-96
Identity = 160/379 (42.22%), Postives = 229/379 (60.42%), Query Frame = 0 
Query:    1 MLPSVGVFGTDHQAQILIALFKAAGFPVTAICGSTYESAKSLANDLKVAFHTNKIQELLLHNEVDIVCVAGTPHQYAEVCTKALSIGKHVFSSTPAGLTLKEANDMLNKAQYYPKLLSVLNHPLRFLSAYSEAKNLIKEGRIGEILICECRIHIKSLIGSSFDWHCDSTMGGGVLQTYGSHIVDILSFLLEQKATQAHGILETFVKQTDKMPNFRQISSDDFCSFQLKYPSGIRACVTLNAHMPNNFVQEVMLVGSKGFLKIVNCNLYGQISGSDTVECLYTEEQG-DRSLY--SSFEDILPGMYLLGCEQLIEGIKLAFESTQLMGMDQSTDRRNADINLITAAANFENGCYTRSVLDAIFESNKQRQWVEIKQPGEE 376
            MLP VGVFGT   A+++I L K  GF V A+ G T E A+ LA ++ V F+T++I E+LLH +VD+VC+   P    ++  K L IGK+V     A  T  +A  M + A YYPKL+S++ + LRFL A+   K LI+EG +GE L+CE ++H  SL+G  ++W CD  MGGG L + G++I+D+L+FL  QKA + HG+L+TFVKQTD +   RQI+SDDFC+FQ+    G+   VTLN ++P  F Q+V +VGS G L  V  +LYGQ + +   E L  +      SL    +F DI P  YL G  ++++ ++ AF+       DQ  DRR  D   +T AA F++  Y   V+D I  S++  +W  I    EE
Sbjct:    1 MLPGVGVFGTSLTARVIIPLLKDEGFAVKALWGRTQEEAEELAKEMSVPFYTSRIDEVLLHQDVDLVCINLPPPLTRQIAVKTLGIGKNVICDRTA--TPLDAFRMTSAAHYYPKLMSIMGNVLRFLPAFVRMKQLIEEGYVGEPLVCEVQVHGGSLLGKKYNWSCDDLMGGGGLHSVGTYIIDLLTFLTGQKAVKVHGLLKTFVKQTDHIKGIRQITSDDFCTFQMVLEGGVCCTVTLNFNVPGEFKQDVTVVGSAGRLLAVGTDLYGQRNSAPEQELLVQDATPVSNSLLPEKAFSDI-PSPYLRGTIKMMQAVRQAFQ-------DQD-DRRTWDGRPLTMAATFDDCLYALCVVDTIKRSSQTGEWQNIAIMTEE 368
The following BLAST results are available for this feature:
BLAST of TCONS_00024078-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GFOD13.883e-9642.22Glucose-fructose oxidoreductase domain-containing ... [more]
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