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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00024080-protein ID=TCONS_00024080-protein|Name=TCONS_00024080-protein|organism=Clytia hemisphaerica|type=polypeptide|length=881bp
MAAKNDAKLAMSLEDSSDDASGSGSGDDEGSADTGASKRNLMESQPAQPV
AGVPGQGVNVAMPAAVKLPGNVSKVVTLNPGGYNETPMLKQQANKTDGNA
TLTEIKFFKPQENTTEVMDKVNQSQSNFNQNSTFPNVLNSAATNLTKHGN
TSTKTGTKKDTFPDEVSNVADNLFNFENDDEGKSAGATEGDESLPGSQGG
PIGEDLMSSMTSPSSNEKKSVIANVSMPTKAPASKKWKVVPSSNDVAGSG
ASVPNDEIKMQVESSIGTSFDASMKKAADNMEAELLPGDYGDASLSLSDL
SGSGSAEESGDSEESGSGADVVESVEPKKKTVIVPNGALRNSSLVDDSVT
DGTDESGDSESGSGSSGSGSGSGDFDSMITNKNEGEAESSPFGLHAIEAT
SSQAKPALKNFRFANATTNNNIKNNSLLHTFGEPEADTQSFLEESDASDD
ADSGSGSESGDDSSGDAASGSVADDDEASFKPSLKNEVSPLAKDNVVRAN
AQQETPHEQPAATKTDIADSDEATVEEVKPSESEAEEEAPQPAPHKRHHH
AHHHKHHHHHHNIEEDVCTDRQNCPPSPTHDRFTNPKAFPQEGDIVTQEF
LEHLMVSQLLEQNVNLFYTNMAGRPGEQGESGNKGPPGTAGTPGMNGFPG
APGEPGLFGAPGKPGPKGIQGPPGFPGGKGDFGSIGEEGLQGPPGAPGVP
GPPGGEEAAAMVRSLEVGGGGRMPNCSFACEGEKAWLQCQPYEAIRILRV
FWGREDDQVGKRAQICGDPPAGLKTNVACEGNGDSGFKKVKNQCQNREAC
ELVASRIFFDDDSCPDSYKYMKVCYECAYDESNAVDVLKMKKKRRKRKRG
SENDFDIRHKRSLWDSSDSGLWKNPVHQIRK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030246 | carbohydrate binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0030246 |
carbohydrate binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 881..881 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 621..706 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 145..164 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..56 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 176..256 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 285..398 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 422..589 |
| IPR008160 | Collagen triple helix repeat | PFAM | PF01391 | Collagen | coord: 623..671
e-value: 3.1E-7
score: 30.0 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PFAM | PF02140 | Gal_Lectin | coord: 737..827
e-value: 1.5E-14
score: 54.1 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PROSITE | PS50228 | SUEL_LECTIN | coord: 729..828
score: 11.783 |
Blast
The following BLAST results are available for this feature:
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