TCONS_00024275-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00024275-protein
Unique Name	TCONS_00024275-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	736

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00024275-protein ID=TCONS_00024275-protein|Name=TCONS_00024275-protein|organism=Clytia hemisphaerica|type=polypeptide|length=736bp
MYDKRIEWIKSKIYNAYQIPLTDKAFENFLATEDNKNEEALKDFLDTPCQ
TEGKSVVFYISTEDREVEIEVECEPELPEENLNGEEGEVEEISAVNNEVK
RGSLTGESQDQNTNEPEEVLVKKTKIITENITEHCIYMGSSAPVEGKDGA
AFFFSHNSPNPIPSPASLDEANSVLPEYFEFGLVDNTSIMNLEESLMQVY
NVLLSYNNHKNESFTNQDGTPMTNEAIIQQQKNQDSKNKLFVRDEFLIQL
QKFTSQITRTIKQIEGDIKLDIPMYAWNLTTDIAGQARDQHLVSMLEETI
HSWEITIASAVERVLKRLPQGNGPLAEVDFWRERNATLSAIFEQMNLPVV
ERALQILDSVHSDSLASFKYHQHELTKYFVEAKDNVRFLSTLERHFKNLS
MGNSFQNVLDTIPSLMNALHMVWIISRHYNKDERMVPLMERIAWEVAERV
ARVINIKKVLREPPIVIKKKAEDARGSLHSWKSSYFEVRARIEASGRDAR
WEFDRKRLFERTDYMAKICEDINDIAQVMEEFHNIFGPELKSVTGDPKRI
DDVLARVEALVIPFENAAFDPFNIRYANNWNAVMDWFRKQVVNIDNEAKH
FIDDSFKTLRSAEGAFDMLLKFKHIRSREAINNQMMRKFNDILLQFGKEV
DQVYDMFKEHESDPPICKNYPPVAGAILWERSLFFRIKASILKFQVMEDM
LNSETGKLVTRKYVAVARIMKAYEEQKYTVWREQVX

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013627	XLOC_013627	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00024275	TCONS_00024275	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013594	Dynein_heavy_dom-1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013594	Dynein heavy chain, domain-1	PFAM	PF08385	DHC_N1	coord: 293..735 e-value: 3.9E-125 score: 418.5

Blast

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BLAST of TCONS_00024275-protein vs. Swiss-Prot (Human)
Match: DYH10 (Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4)

HSP 1 Score: 509.605 bits (1311), Expect = 9.068e-159
Identity = 286/667 (42.88%), Postives = 401/667 (60.12%), Query Frame = 0

Query:   88 EVEEISAVNNEVKRGSLTGESQDQNTNEPEEVLVKK------TKIITENITE--HCIYMGSSAPVEGKDGAAFFFSHNSPNPIPSPASLDEANSVLPEYFEFGLVDNTSIMNLEESLMQVYNVLLSYNNHK-------------NESFTNQDGTPMTNEAIIQQQKNQDSKNKLFVRDEFLIQLQKFTSQITRTIKQIEGDIKLDIPMYAWNLTTDIAGQARDQHLVSMLEETIHSWEITIASAVERVLKRLPQGNGPLAEVDFWRERNATLSAIFEQMNLPVVERALQILDSVHSDSLASFKYHQHELTKYFVEAKDNVRFLSTLERHFKNLSMGNSFQNVLDTIPSLMNALHMVWIISRHYNKDERMVPLMERIAWEVAERVARVINIKKVLREPPIVIKKKAEDARGSLHSWKSSYFEVRARIEASGRDARWEFDRKRLFERTDYMAKICEDINDIAQVMEEFHNIFGPELKSVTGDPKRIDDVLARVEALVIPFENAAFDPFNIRYANNWNAVMDWFRKQVVNIDNEAKHFIDDSFKTLRSAEGAFDMLLKFKHIRSREAINNQMMRKFNDILLQFGKEVDQVYDMFKEHESDPPICKNYPPVAGAILWERSLFFRIKASILKFQVMEDMLNSETGKLVTRKYVAVARIMKAYEEQKYTVWRE 733
            +VE +  V    KR SL  ES  Q  N  +E + K+      +K   ++I E  H   + +  P E  D    FF  N+   I     + EA  ++PE  E+G+++   +  L+  + QV+   LS+N H+             N S    D  PM  EA+       +  +   +RDEFL+ +QKF S I RT++Q+EG+IKL++P+ +  +  +++  A D   V +LE+ + +W   I++AVE  LK+ PQG GPLAE++FWRERNATLSA+ EQ  LP+V + L ++    S  +A+ +    EL K+  EA DNVRFLST+ER+FKN++ G+ F  VLDTIP++M+AL MVWIISRHYNKDERM+PLMERIAWE+AERV RV+N++ + +E     + K  +AR +L  WK +YF+ RA+IEASGR+ RWEFDRKRLFERTDYMA IC+D++D+ Q++EEF+NIFGPELK+VTGDPKRIDDVL RV+ LV P EN  FDPF+I+ +  W  VMD F+ +V+ ID   K F+ +                          + N                      ++K H   PP       VAGAI WERSLFFRIK +IL+FQ ++++L+S+ G+ V +KY+ V R MK YE++KY  W E
Sbjct:   30 KVESVDKVR--AKRVSLRTESLGQPLNREDEEMDKEISEKLPSKRTAKHIMEKMHLHMLCTPLPEEFLDQNVVFFLRNTKEAISEATDMKEAMEIMPETLEYGIINANVLHFLKNIICQVFLPALSFNQHRTSTTVGVTSGEVSNSSEHESDLPPMPGEAV-------EYHSIQLIRDEFLMNVQKFASNIQRTMQQLEGEIKLEMPIIS--VEGEVSDLAADPETVDILEQCVINWLNQISTAVEAQLKKTPQGKGPLAEIEFWRERNATLSALHEQTKLPIVRKVLDVIKESDSMLVANLQPVFTELFKFHTEASDNVRFLSTVERYFKNITHGSGFHVVLDTIPAMMSALRMVWIISRHYNKDERMIPLMERIAWEIAERVCRVVNLRTLFKENRASAQSKTLEARNTLRLWKKAYFDTRAKIEASGREDRWEFDRKRLFERTDYMATICQDLSDVLQILEEFYNIFGPELKAVTGDPKRIDDVLCRVDGLVTPMENLTFDPFSIKSSQFWKYVMDEFKIEVL-IDIINKIFVQN--------------------------LENP--------------------PLYKNH---PP-------VAGAIYWERSLFFRIKHTILRFQEVQEILDSDRGQEVKQKYLEVGRTMKEYEDRKYEQWME 628

The following BLAST results are available for this feature:

BLAST of TCONS_00024275-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00024275-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH10	9.068e-159	42.88	Dynein heavy chain 10, axonemal OS=Homo sapiens GN...	[more]

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TCONS_00024275-protein (polypeptide) - C. hemisphaerica