TCONS_00024355-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024355-protein
Unique NameTCONS_00024355-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length257

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024355-protein ID=TCONS_00024355-protein|Name=TCONS_00024355-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MIVERKNGDQVSLRQHSHNTETLKKLSKFRKDGVLCDITVVINDKKFPAH
KNILASGSQYFHTMFTTKMMESNLTEVNLESVCPDVFEQILDYFYEGTLV
IDMNSVTDTLHAASLLLLKDIENECFYYLKRNLSLKNCVFIKSIGEFYSN
KELIKKTNEFLVKNFQRLSTEVEVANFSLKDLKGLLKSEDLMCKSEDVIA
TVVNKWLCARPVDVTPEDVSSLLKTIRIPALSEDGTHMLTSTMKGINIFF
LYTEYTP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013665XLOC_013665Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024355TCONS_00024355Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011705BACK
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 36..133
e-value: 4.6E-25
score: 99.3
IPR000210BTB/POZ domainPFAMPF00651BTBcoord: 27..132
e-value: 6.3E-28
score: 97.1
IPR000210BTB/POZ domainPROSITEPS50097BTBcoord: 36..103
score: 20.375
IPR011705BTB/Kelch-associatedSMARTSM00875BACK_2coord: 138..244
e-value: 2.1E-6
score: 37.3
IPR011705BTB/Kelch-associatedPFAMPF07707BACKcoord: 138..233
e-value: 2.4E-13
score: 50.0
NoneNo IPR availableGENE3D3.30.710.10coord: 22..172
e-value: 8.3E-36
score: 122.6
NoneNo IPR availableCDDcd14735BACK_Kelchcoord: 133..191
e-value: 2.60722E-7
score: 45.1623
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 13..131

Blast
[Close]
BLAST of TCONS_00024355-protein vs. Swiss-Prot (Human)
Match: KLH17 (Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.878e-34
Identity = 72/229 (31.44%), Postives = 119/229 (51.97%), Query Frame = 0 
Query:    6 KNGDQVSLRQHSHNTETLKKLSKFRKDGVLCDITVVINDKKFPAHKNILASGSQYFHTMFTTKMMESNLTEVNLESVCPDVFEQILDYFYEGTLVIDMNSVTDTLHAASLLLLKDIENECFYYLKRNLSLKNCVFIKSIGEFYSNKELIKKTNEFLVKNFQRLSTEVEVANFSLKDLKGLLKSEDLMCKSEDVIATVVNKWLCARPVDVTPEDVSSLLKTIRIPALSED 234
            + G  V+     H  +    +S+ R+ G+LCDI + +  K+  AHK +LAS S YFH MFT +M ES  T V L  + P   +Q++ + Y   +V+   +V   L AASLL L  + + C  +L   L   NC+ I+   + +S  +L+K  + +++++F  ++   E     LK +  L+ S+ L   SE+ +   V  W+    VD   + V  L+K +R+P LS D
Sbjct:   62 REGHSVAHNSKRHYHDAFVAMSRMRQRGLLCDIVLHVAAKEIRAHKVVLASCSPYFHAMFTNEMSESRQTHVTLHDIDPQALDQLVQFAYTAEIVVGEGNVQTLLPAASLLQLNGVRDACCKFLLSQLDPSNCLGIRGFADAHSCSDLLKAAHRYVLQHFVDVAKTEEFMLLPLKQVLELVSSDSLNVPSEEEVYRAVLSWV-KHDVDARRQHVPRLMKCVRLPLLSRD 289
The following BLAST results are available for this feature:
BLAST of TCONS_00024355-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLH171.878e-3431.44Kelch-like protein 17 OS=Homo sapiens GN=KLHL17 PE... [more]
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