TCONS_00024466-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024466-protein
Unique NameTCONS_00024466-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1122

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024466-protein ID=TCONS_00024466-protein|Name=TCONS_00024466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1122bp
MGFRLFLVNLLFAMAIHETEGTVTSTLEDQVTDMSKALNDFVNTNLGVDQ
LQEHLSKITSKTKTQEGSEILRKFHDSLEEKVRKANQTLEELIDVIKNDF
KGPGDGDDKPITSCCDYDARKTTYSNLFKNWVNFDDVCGYASVDHNLCPN
QLRTLEDKVHRLTQSVMLEKMKEAYNKHGKGSSRHIYLGTTDGYFLGYPA
DRPPEQETMCNCSAFDPRYRPWYPNLVNTKEGKEFVIVLDYSSKMKGDLL
KQAKKVVHNLLRIIDGKDKIVLRIISGGNSIAPSEFDCLKFLTEAHPSVI
KVLKDFVDRTGQTGLLEYAKVFRDSFRLFGSSNKKKLFILITSGEHDESY
SQVKEYYKNGYKKACQASVVIFLVQGSSTPLITRQEHEGLKQEGCDACND
QNCDSFNKFQLVDIYPRYNEADIRQQVAKIYKAFQNELGPPQLQFSMPYE
DFYGLGTMIDACTRVVSDDNKLLGVLCLSFLSNELFGVTAEVANTKDAYP
FLIDKSGTTYIHPYYINPELHASGSRIDITNFETSIQFQNQVYNSMKSGG
EDEKSFKVESSVPLGTLGAKFESKNFTYIWREVEGSSFSVGVAVSSVYKD
DLQLQSSTTQGNELYHRLSLQDGIQDELCSHYGYIAIKDQPVVSIAPDSF
EQPSVYYEKESKETVKTLQNYFNETYVENPTAFKSNTIRNEIRQAVMATN
LMNKIWTGDESNQRLIIKWRYIGMENGVFRIFPGIEIPEFDPRQQQWYHL
AETFPGKLVFTTPYKDSNDPSQASILSLSKQITEELSGVKQGSGVIGMDF
EFRYFQFLIERDLTLCAGKVIRGTCSIINTDGFLLYHNGTDGDLYKHIHL
VEKEPNVARKLLQSGIMKKTSCIEYNDRLPRTIWFYSLDDVTVSQSDNGT
FWLVPIKGTNLLLLFTKHSNVEKEQEKCECSKPSLKGEVLGKCREGVDEA
SCDCPCYVEKACLSDLFETDAQRQSTLICQPRSMGQKMPDSTHLKNLMKD
KMPLDECYPLNCSHFQRSDECNLYGCFWNAQQCSEVQRPTTTKNPTTDEQ
GGDSDDNTTIIIIVVVVVVVLIILIVIIACVVKRRKRQSTPSQDHHLKPP
LPPHPPTYSETIVNRYEEEFHA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013736XLOC_013736Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024466TCONS_00024466Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availableGENE3D3.30.450.20coord: 149..238
e-value: 0.072
score: 12.9
NoneNo IPR availableGENE3D1.20.5.510coord: 1039..1087
e-value: 1.2E-7
score: 30.9
NoneNo IPR availableGENE3D1.20.1270.60coord: 12..102
e-value: 3.0E-4
score: 19.9
NoneNo IPR availableGENE3D3.30.450.20coord: 651..801
e-value: 2.3E-13
score: 50.2
NoneNo IPR availableGENE3D3.30.450.20coord: 450..601
e-value: 1.2E-7
score: 31.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1089..1109
IPR002035von Willebrand factor, type AGENE3D3.40.50.410coord: 239..438
e-value: 4.6E-8
score: 32.4
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 234..374
score: 8.545
IPR002035von Willebrand factor, type ASUPERFAMILY53300vWA-likecoord: 232..361

Blast
BLAST of TCONS_00024466-protein vs. Swiss-Prot (Human)
Match: CAHD1 (VWFA and cache domain-containing protein 1 OS=Homo sapiens GN=CACHD1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.132e-41
Identity = 257/1151 (22.33%), Postives = 446/1151 (38.75%), Query Frame = 0
Query:   26 TLEDQVTDMSKALNDFVNTNLGVDQLQEHLSKITSKTKTQEGSEILRKFHDSLEEKVRKANQTLEELIDVIKNDFKGPGDGDDKPITSCCDYDARKTTYSNLFKNWVNFDDVCGYASVDHNLCPNQLRTLEDKVHRLTQSVMLEKMKEAYNKHGKGSSRHIYLGTTDGYFLGYPADRPPEQETMCNCSAFDPRYRPWYPNLVNTKEGKEFVIVLDYSSKMKGDLLKQAKKVVHNLLRIIDGKDKIVLRIISGGNSIAPSEFD-CLK-FLTEAHPSVIKVLKDFVDRTGQT-GLLEYAKVFRDSFRLFGSSNKKKLFIL------------ITSGEHDESYSQVKEYYKNGYKKACQASVVIFLVQGSSTPLITRQEHEGLKQEGCDACNDQNCDSF---NKFQLVDIYPRY----NEADIRQQVAKIYKAFQNELGPPQLQFSMPYEDFYGLGTMIDACTRVVSDDNKLLGVLCLSFLSNELFGVTAEVANTKDAYPFLIDKSGTTYIHPYYINPELHASGS-RIDITNFETSIQFQNQVYNSMK-SGGEDEKSFKVESSVP-----LGTLGAKFESKNFTYIWREVEGSSFSVGVAVSSVYKDDLQLQSSTT--QGNELYHRLSLQDGIQDELCSHYGYIAIKDQPVVSIAPDSFEQPSVYYEKESKETVKTLQNYFNETYVENPTAFKSNTIRNEIRQAVMATNLMNKIWTG--DESNQRLIIKWRYIGMENGVFRIFPGIEIPE-FDPRQQQWYHLAETFPGKLVFTTPYKDSNDPSQASILSLSKQITEELSGVKQGS--GVIGMDFEFRYFQFLIERDLTLC---AGKVIRGTCSIINTDGFLLYHNGTDGDLYKHI-----HLVEKEPNVARKLL-QSGIMKKTSCIEYNDRLPRTIWFYSLD---DVT--VSQSDNGTFWLVPIKGTNLLLLFTKHSNVEKEQEKCE----CSKPSLKGEVLGKCREGVDEASCDCPCYVE-KACLSDLFETDAQRQSTLICQPRSMGQKMPDSTHLKNLMKDKMPLDECYPLNCSHFQRSDEC-NLYGCFW---NAQQCSEVQRP------------TTTKNPTTDEQGGDSDDNTTIIIIVVVVV------VVLIILIVIIACVVKRRKRQSTPSQDHHLKP 1099
            ++ D+   ++  +       LGV  +Q   +      K   G   +++    + EK  +    +     V++  +          I  CC        +   F   V+    C   S   N       +      R   SV+ + +K           +  Y  + +G F  +PA      +  C  S ++ R RP Y + V   + K  V++LD+ + +    L+ AK     +L  ID  DKI   +++  +++     D C K FL+ A     + +  FV     +    ++A  F+ +F+L  S+N    F              ITS +  E   +      N        SV+I      +  +   +E   L+        +QN   +   ++  L  I          +++   V + Y    N +    + FS+P+ D  G G +I   ++     N LLG++ +      +        ++  +Y FLID  G T +HP    P L +      DI ++E   +F+    N +    G    +  V SS+      L   G   E+ N +Y W+ V+ +SF + + V        QL++  T      LYHRL L    Q   C H+  +A  + P + ++  SF  P   YE  S+   K +  ++     +N     +  ++  +R  VMAT+ +   W    + S+    I  RYI   NGV RI+PG  + + FDP ++QWY  A   PG +  T PY D        ++++S  I    + +  G    V+G+DF  RYF  ++   L +C    G  IR  C I+   G+L+ H  T  D   H      H+  KEP VA  +L     +KK  C  ++DR  +  + ++     D+T  V  S    + L  I GTN  +            E C+    C+   +    L   R   +E  C C C +E   C  +L   + +  S   C+   + Q+    T +   ++D   L +C    CS    S +C  +  C W   ++   + + +P               K+P  D+ G   D+  T+ +I    V      ++  I+++++A    R +      Q  H+ P
Sbjct:   40 SILDEAQVLASQMRRLAAEELGVVTMQRIFNSFVYTEKISNGESEVQQLAKKIREKFNRYLDVVNRNKQVVEASYTAHLTSPLTAIQDCCTIPPSMMEFDGNFNTNVSRTISCDRLSTTVN-------SRAFNPGRDLNSVLADNLK------SNPGIKWQYFSSEEGIFTVFPA-----HKFRCKGS-YEHRSRPIYVSTVR-PQSKHIVVILDHGASVTDTQLQIAKDAAQVILSAIDEHDKI--SVLTVADTVRTCSLDQCYKTFLSPATSETKRKMSTFVSSVKSSDSPTQHAVGFQKAFQLIRSTNNNTKFQANTDMVIIYLSAGITSKDSSEEDKKATLQVINEENSFLNNSVMILTYALMNDGVTGLKELAFLRDLA-----EQNSGKYGVPDRMALPVIKGSMMVLNQLSNLETTVGRFYTNLPNRMIDEAV-FSLPFSDEMGDG-LIMTVSKPCYFGNLLLGIVGVDVNLAYILEDVTYYQDSLASYTFLIDDKGYTLMHPSLTRPYLLSEPPLHTDIIHYENIPKFELVRQNILSLPLGSQIIAVPVNSSLSWHINKLRETGK--EAYNVSYAWKMVQDTSFILCIVVIQPEIPVKQLKNLNTVPSSKLLYHRLDLLG--QPSACLHFKQLATLESPTIMLSAGSFSSP---YEHLSQPETKRMVEHYTAYLSDNTRLIANPGLKFSVRNEVMATSHVTDEWMTQMEMSSLNTYIVRRYIATPNGVLRIYPGSLMDKAFDPTRRQWYLHAVANPGLISLTGPYLDVG--GAGYVVTISHTIHSSSTQLSSGHTVAVMGIDFTLRYFYKVLMDLLPVCNQDGGNKIR--CFIMEDRGYLVAH-PTLIDPKGHAPVEQQHITHKEPLVANDILNHPNFVKKNLCNSFSDRTVQRFYKFNTSLAGDLTNLVHGSHCSKYRLARIPGTNAFVGIVN--------ETCDSLAFCACSMVDRLCLNCHRMEQNECECPCECPLEVNECTGNLTNAENRNPS---CE---VHQEPVTYTAIDPGLQDA--LHQCVNSRCSQRLESGDCFGVLDCEWCMVDSDGKTHLDKPYCAPQKECFGGIVGAKSPYVDDMGAIGDEVITLNMIKSAPVGPVAGGIMGCIMVLVLAVYAYRHQIHRRSHQ--HMSP 1131          
The following BLAST results are available for this feature:
BLAST of TCONS_00024466-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAHD11.132e-4122.33VWFA and cache domain-containing protein 1 OS=Homo... [more]
back to top