TCONS_00024469-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024469-protein
Unique NameTCONS_00024469-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length317

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024469-protein ID=TCONS_00024469-protein|Name=TCONS_00024469-protein|organism=Clytia hemisphaerica|type=polypeptide|length=317bp
MEVNCKSRYHLKISTDQRVYKDWKKNGGGPIEIKYADNCKKCKRHKKNLI
KQKKRKYDVYKHSLQNQPPPEYHSRKNSLKMTTSKSSEDGALHIMSIPRV
PPQKEWDPRMTMTSPIEWETSPLVTADEESDMSTTIINTSTRPDVLIQNK
GKHLPDVISNNEAQRQEDEETDRESSIRSCATHKPRVKKSRSVDVAERNV
TSTPKKCRSRSIPTDQSIPNKYTKSSTTDENEHFIIVNIPENAFKPGMQN
ADIHNHNTILSIADDTATVVSEGVKCRYCLTNDTINNEPLISPCHCCGTS
KFVHQSCLEKWXNVDTV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013737XLOC_013737Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024469TCONS_00024469Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011016Znf_RING-CH
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 275..317
e-value: 7.3E-5
score: 25.6
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 276..313
e-value: 2.3E-10
score: 40.3
IPR011016Zinc finger, RING-CH-typePROSITEPS51292ZF_RING_CHcoord: 268..317
score: 16.053
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 270..316
e-value: 5.6E-11
score: 41.7
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 273..314

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024469-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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