TCONS_00024622-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024622-protein
Unique NameTCONS_00024622-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length521

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024622-protein ID=TCONS_00024622-protein|Name=TCONS_00024622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
SQMNKNLKVEILKTFRELFDGRFIEHRSTFLSDVDQLAAIQLALLLLQKK
LHIQGDITPLDLFNIQHKIIKQKQQESEENLHASSLTQEPITKDGILKIV
TFDEVYEAYNEFLTQCNMIDQQDVMKFIRVHAKDDSENQTKPRCLKLLQK
IEKQDLSSPALSQSPSRPALLQLRRVILSYLQLLVNSRDEIALARVIDIP
TRGITHKAFTDIRQLAKQKDAPMFQTVASFVRMLLLGGKGYVPDEHHILY
EHREGLGEFVELMDKLQTAIDEEHDIKSAIFSIFKILKCALIRAKIPTFS
TNIVGAGFSQLLQKTKSFLGEQVDKSCSDKTLQLRGFLDYLACVWGNDIS
LNSSQLCGVLSTPQVNEKEQMKKISSLLTQFSTPKCDNDTPIKPKSQKRF
HNNSPIQQHLQKERKTTIQDVQDLNSSPEELAKPIKLIRVPNEIKSISLE
RKSEAETIRETSEPPEKKPKSRLNLESRLTDKENNKTMKKVKKTSTKPRQ
KVSKKCALLPGQKTLNQFFKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013828XLOC_013828Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024622TCONS_00024622Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.486.10coord: 175..295
e-value: 6.6E-14
score: 51.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..508
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..409
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 175..343

Blast
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BLAST of TCONS_00024622-protein vs. Swiss-Prot (Human)
Match: PARI (PCNA-interacting partner OS=Homo sapiens GN=PARPBP PE=1 SV=3)

HSP 1 Score: 114.005 bits (284), Expect = 9.043e-27
Identity = 81/297 (27.27%), Postives = 142/297 (47.81%), Query Frame = 0 
Query:   10 EILKTFRELFDGRFIEHRSTFLSDVDQLAAIQLALLLLQKKLHIQGDITPLDLFNIQHKIIKQKQQESEENLHASSLTQEPITKDGILKIVTFDEVYEAYNEFLTQCNMIDQQDVMKFIRVHAKD-DSENQTKPRCL------KLLQKIEKQDLSSPALSQS----PSRPALLQLRRVILSYLQLLVNSRDEIALARVIDIPTRGITHKAFTDIRQLAKQKDAPMFQTVASFVRMLLLGGKGYVPDEHHILYEHREGLGEFVELMDKLQTAIDEEHDIKSAIFSIFKILKCALIRAK 295
            +++K FR+ +       R+T       L A+QL++    K+   +  ++  D+      ++ +K     EN+  +                 +++V + Y++FL   NM+D  DV +  R    + ++ N   P  L      K     ++ DLS P    S     +    L  R++I SYL LLVNS++++A+A +++IP RG+  +AFTD++  A++K   +F    SF+R + LGGKGY P     L  H +GL  F+  +DKL   + E  +   A   I  ++K  LI+ +
Sbjct:   11 DMIKEFRKNWRALCNSERTTLCGADSMLLALQLSMAENNKQHSGEFTVSLSDVLLTWKYLLHEKLNLPVENMDVTD---------------HYEDVRKIYDDFLKNSNMLDLIDVYQKCRALTSNCENYNTVSPSQLLDFLSGKQYAVGDETDLSIPTSPTSKYNRDNEKVQLLARKIIFSYLNLLVNSKNDLAVAYILNIPDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAPPPSDPLRTHVKGLSNFINFIDKLDEILGEIPNPSIAGGQILSVIKMQLIKGQ 292
The following BLAST results are available for this feature:
BLAST of TCONS_00024622-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PARI9.043e-2727.27PCNA-interacting partner OS=Homo sapiens GN=PARPBP... [more]
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