TCONS_00024741-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024741-protein
Unique NameTCONS_00024741-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length110

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024741-protein ID=TCONS_00024741-protein|Name=TCONS_00024741-protein|organism=Clytia hemisphaerica|type=polypeptide|length=110bp
MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPATLVRICDECN
YGSYQGRCVICGGPGVSDAYYCRECTIQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKKR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013896XLOC_013896Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024741TCONS_00024741Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005345PHF5
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005345PHF5-likePFAMPF03660PHF5coord: 1..104
e-value: 3.8E-50
score: 168.3
IPR005345PHF5-likePIRSFPIRSF016468RDS3pcoord: 1..110
e-value: 6.4E-52
score: 172.3

Blast
[Close]
BLAST of TCONS_00024741-protein vs. Swiss-Prot (Human)
Match: PHF5A (PHD finger-like domain-containing protein 5A OS=Homo sapiens GN=PHF5A PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.223e-74
Identity = 106/110 (96.36%), Postives = 107/110 (97.27%), Query Frame = 0 
Query:    1 MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPATLVRICDECNYGSYQGRCVICGGPGVSDAYYCRECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
            MAKHHPDLIFCRKQ GVAIGRLCEK DGKCVICDSYVRP TLVRICDECNYGSYQGRCVICGGPGVSDAYYC+ECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR
Sbjct:    1 MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAYYCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR 110
The following BLAST results are available for this feature:
BLAST of TCONS_00024741-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHF5A6.223e-7496.36PHD finger-like domain-containing protein 5A OS=Ho... [more]
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