TCONS_00024816-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024816-protein
Unique NameTCONS_00024816-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length578

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024816-protein ID=TCONS_00024816-protein|Name=TCONS_00024816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=578bp
XRKNLEANLHILEVIEHGYRIPFRYNPPPFELKNNKSALRNKKFVEETLE
GLLREGKIFVQRPFATNPLSVAEDPSGKKRLILDVSFLNQFLWKEKIKFD
DWKVFEDFIHSDEEAXLNQFLWKEKIKFDDWKVFEDFIHSDEEAYLFKFD
LKSGYHHVDIHSDHQKYLGFSWNFGKGPKRYFLYSVLPFGLSSGPLIFTK
RVRVLIKFWRSHGIRIACFLDDALSVEYLREKAKENSLFVKDSLDQSGFV
INEEKSQWDPVTKIQWLGIQVDFENKTYSISEKRITSLLKSLENIFDHPT
RTSARQLSCVAGKIVSMKFVLGNVIRLKTRLIYKLIESRVSWDKKINVTF
FHDVLRELLFWKFNLRELNNKSIRKYEIPDLKVFSDASATGIGAILDKNV
CYRNLKRLEIEESSTFRELLAIKYAIDSFDEMLDSKTILWHTDNISTAII
IRVGSNKDLLQGLANNIYLSCKKKDVKLTVTWISRDKNGQADKVSKTTDY
DDWFVKSSFVHSLETKWGKFSIDLFADSNNTKCERFCSRYFSPGSFKVDA
FSFDWSGEFCYMVPPPYLIPKTIKHFLA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013947XLOC_013947Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024816TCONS_00024816Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableGENE3D3.10.10.10coord: 17..183
e-value: 2.7E-14
score: 52.7
NoneNo IPR availableGENE3D3.30.70.270coord: 184..275
e-value: 5.1E-11
score: 42.0
NoneNo IPR availableCDDcd03714RT_DIRS1coord: 149..271
e-value: 1.58385E-24
score: 98.1847
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 137..452
coord: 20..105
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 140..271
e-value: 2.2E-15
score: 56.7
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..271
score: 11.52

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024816-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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