TCONS_00025298-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025298-protein
Unique NameTCONS_00025298-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length593

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025298-protein ID=TCONS_00025298-protein|Name=TCONS_00025298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=593bp
MSDKEELLGIEDVDLDDDLEDDSEVEFEFPLKNVVGGESRSSNQEDQNNV
TIDEYLIKTGECGKYQIIMVFLMGFAMIPMSFPPLIFYYIGYDPPWSCTA
NVSHPNGTFCTTHNASQLFKHTENDRCSLNQGEWHYMNHGRSSVVTEFNL
VCKDAWLDALTGSIVFVGWGIGILTLGYLSDQYGRKKILYPAMLLTLLAL
MAHAFVTSIWQLLVVRFIMGFVYSGPALNHYILSTEIVGPNRRALASTLS
SCAWPIGAFLMTIKAYYLNNWRHLALFSSVPYMFGLITCICVPESFRWLH
VKGRTAEAEKILQKASNCNNTNFINDLSLEKYQNSSQEKAKKVSYLVLFK
SCKLFVMMISQAFIWFNSGMVYYALSWAFSDLGGNMYLNFVWSTLIELPG
ALISYFLLNFIGRKKTCIIIYLLTGLFCLVVTCIPESEKVARLVFGLLGK
LMASAGFMSIYMWSSEIYPTCLRTQGMGINIVTSRAGAATSPFIKLLNRI
HPAAPFGLMTTTCFISMLLAFVLPETFRKPTRETLDDIYQDNKTYTHKIH
FASFTQEDGGGDEGMVRIDGNENDEDIEDTEHLLASPGDYAIA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014206XLOC_014206Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025298TCONS_00025298Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 329..550
e-value: 1.6E-22
score: 79.3
NoneNo IPR availableGENE3D1.20.1250.20coord: 65..309
e-value: 4.6E-27
score: 94.1
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 158..526
e-value: 1.1E-25
score: 90.4
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 176..192
IPR020846Major facilitator superfamily domainPROSITEPS50850MFScoord: 67..528
score: 17.949
IPR020846Major facilitator superfamily domainCDDcd06174MFScoord: 159..524
e-value: 1.63779E-21
score: 93.9176
IPR020846Major facilitator superfamily domainSUPERFAMILY103473MFS general substrate transportercoord: 158..531

Blast
[Close]
BLAST of TCONS_00025298-protein vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.133e-59
Identity = 153/520 (29.42%), Postives = 251/520 (48.27%), Query Frame = 0 
Query:   52 IDEYLIKTGECGKYQIIMVFLMGFAM-IPMSFPPLIFYYIGYDPPW-----SCTANVSHPN---------GTFCTTHNASQLFKHTENDRCSLNQGEWHYMNHGRSSVVTEFNLVCKDAWLDALTGSIVFVGWGIGILTLGYLSDQYGRKKILYPAMLLTLLALMAHAFVTSIWQLLVVRFIMGFVYSGPALNHYILSTEIVGPNRRALASTLSSCAWPIGAFLMTIKAYYLNNWRHLALFSSVPYMFGLITCICVPESFRWLHVKGRTAEAEKILQKASNCNNTNFINDLSLEKYQNSSQEKAKKVSYLVLFKSCKLFVMMISQAFIWFNSGMVYYALSWAFSDLGGNMYLNFVWSTLIELPGALISYFLLN--FIGRKKTCIIIYLLTGLFCLVVTCIPESEKVARLV------FGLLGKLMASAGFMSIYMWSSEIYPTCLRTQGMGINIVTSRAGAATSPFIKLLNRIHPAAPFGLMTTTCFISMLLAFVLPETFRKPTRETLDDIYQDNKTYTHK 548
            ++E     GE G YQ+ + FL+   + + ++   ++   +G  P +         N SH N         G +  T N S++ KH              + +   +S+ +E+ L+   ++  +   S  F G  +G+++ G LSD++GRKK+      L +L  +A+ F  S     V RF++G +  G +L  ++L  E VG    ALA ++    + +G     +  Y++ +WR LA+  ++      +  + +PES RWL+ +GR +EAE+ L   +   N       SL    N S  +    S+L LF+   L    +   FIWF   +VYY L+ +  DLGG++Y N   S LIE+P   +  +L+N  + GRK+T      L GL CL+V  +PE +              LLGKL  SA F  +Y+++SE+YPT +R  G+G   + SR G   +PFI  L  +  + PF +   T   S LL+ +LPET   P  ET  D+    + Y+++
Sbjct:    3 VEEAFQAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHV-------------HFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAK-RNRKLKCTFSLTHPANRSCRETG--SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLETFSDL----QVYSYR 502
The following BLAST results are available for this feature:
BLAST of TCONS_00025298-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF1.133e-5929.42Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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