TCONS_00025648-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00025648-protein
Unique NameTCONS_00025648-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1009

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00025648-protein ID=TCONS_00025648-protein|Name=TCONS_00025648-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1009bp
MSYHQLRSDDPDNMSEMTEQTSFINPADAIANQLSKNIALDIGSKWKDYN
SNRRIEKHKVDSHRKGPAPIEEADGMKKGVTKATYGTLDSDVEELEFDDI
DTRQNAASDSNPYNKVKPKTNAKGDSLASCRALIVYFSKLAKSRDDDETI
DMNFVDSLLQNGADINFSDKHGQTVMHEISRAWHPDVAKFAIQHGADVNK
ADKHGRSALHLAAAVDYDDMIEFLVHNGANLGAKTVGENQTPMHYAAKNN
AAASLKMMLRLGAHINDRDYKKRTPLFVAAETARAEAARFLIEQGAPAGV
YDSSGTSCLALMIEKMPHVAIEAAEQFHLLDRAFRKHYYYLSYIEPDPLF
LLPPIPTSKRERREQKENQKEEKRLMKEQGKKAKKREKTYAKTPLEVIVQ
FNQLDMVMHPVFQRLLHVKWGLFGKFGSLINVSINLVYTLIWTFLGIFLP
KDHVYYTPMSSMWWRLVLELIAVSLTCYFIYMEISQLRITEKVHNRWRQW
RTRHVEKDLQYCHERWPEEKKYLESELAQIRTFQRTYFREPWNIFEWIAY
FVVLTLVLTRILAVAMNDRVAESIHPRIYSLGLIVIWLRFMRACRAFRSL
GPFICILGSVIEDTMKFAFLFFEFFIPYTVGFWIIFGGPENPGTDWTEFN
DLIYSVWGMTLMGDFDWEGLIKKDRLMAQILCGTYFALAGVVCMNLYIAL
LSDTFARVYAQAQANAVMQQAKTVILLEGKLEKEKKLKFGHYLQDECSPE
EVYSRDEGNSPDDHDNDMFEKVTRQITNRIDELEDNMKRSGQMLSDGRHG
GPGGGGGGPGGPGSPGADGGVSSLVNHQTGQIDDVKYELSELKNLMHKMM
SLPPPSNKEPSEIPPKGLVVSLDPIYPPAHPLPGYQQQPPPNPYPPQTNN
PYPPPPSMGYMPPPNYATDAEADRGKGPRRRGRRGKKGPGSGYDSDSNSF
YSEQVPVQHHQRPPPHHQQQQRRPRSPSSVQSAPISKKNRRKKKNLGGSW
EDIRADINT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014393XLOC_014393Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00025648TCONS_00025648Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR005821Ion_trans_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005216ion channel activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006811ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006811 ion transport
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016020 membrane
molecular_function GO:0005216 ion channel activity
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 766..786
NoneNo IPR availableCOILSCoilCoilcoord: 359..388
NoneNo IPR availableGENE3D1.10.287.70coord: 426..710
e-value: 1.6E-10
score: 40.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 791..825
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..1009
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..385
NoneNo IPR availableCDDcd00204ANKcoord: 151..259
e-value: 9.71278E-27
score: 106.314
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 171..200
e-value: 3.8
score: 16.5
coord: 204..233
e-value: 0.0018
score: 27.5
coord: 271..302
e-value: 3.1
score: 16.8
coord: 238..267
e-value: 0.01
score: 25.0
coord: 128..167
e-value: 2200.0
score: 2.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 204..236
score: 11.781
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 271..303
score: 9.751
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 238..270
score: 11.381
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 171..203
score: 10.072
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 356..414
e-value: 0.2
score: 10.3
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 136..213
e-value: 2.8E-19
score: 68.4
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 214..326
e-value: 1.1E-26
score: 92.7
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 238..296
e-value: 6.2E-8
score: 33.0
coord: 154..234
e-value: 5.2E-10
score: 39.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 151..309
score: 43.954
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 153..312
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 533..712
e-value: 1.3E-16
score: 60.5

Blast
[Close]
BLAST of TCONS_00025648-protein vs. Swiss-Prot (Human)
Match: ANR35 (Ankyrin repeat domain-containing protein 35 OS=Homo sapiens GN=ANKRD35 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.767e-17
Identity = 58/181 (32.04%), Postives = 84/181 (46.41%), Query Frame = 0 
Query:  158 LLQNGADINFSDKHGQTVMHEISRAWHPDVAKFAIQHGADVNKADKHGRSALHLAAAVDYDDMIEFLVHNGANLGAKTVGENQTPMHYAAKNNAAASLKMMLRLGAHINDRDYKKRTPLFVAAETARAEAARFLIEQGAPAGVYDSSGTSCLALMIEKMPHVAIEAAEQFHLLDRAFRKHY 338
            LL NGADIN  ++ G T +H  + +  P   K  +QHGA+ +  D   RS LH AA+      +  L  + A L      + +TP+  A+    AA    +L+ GA +N  D   ++ L +A E   AE A  L+  GA AG  DS+G   L        H A+      H  D+A  +H 
Sbjct:   73 LLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDVLD-NDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDAL--------HYAL------HTQDKALWRHL 238
The following BLAST results are available for this feature:
BLAST of TCONS_00025648-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR352.767e-1732.04Ankyrin repeat domain-containing protein 35 OS=Hom... [more]
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