TCONS_00026352-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026352-protein
Unique NameTCONS_00026352-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length415

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026352-protein ID=TCONS_00026352-protein|Name=TCONS_00026352-protein|organism=Clytia hemisphaerica|type=polypeptide|length=415bp
MQEGYREKEHLLSLKVMRLTKPSVKPLLHVTNEPQDLPGDIFNNSIFTDV
ATTKGAEMLNCGELLSLPQAFGSIYLGETFSCYVSILNDSNQVTKDVTLK
TDIQTSSQRFQLTASTPRDLLSPDESQDEVLSYEVKELGTHILICAVSYT
SPNGEKLFMRRFYKFQVLKPLEVKTKFYNGEFDSVFLEAQVQNITTNPIS
MDHVTLDPSQYYMVLPLNELTPVGEETMEKGVDEIFDSTYINPMDMRQYL
YKLIPKESHKLELRAMPMSPIGKLDIVWRTNFGEIGRLQTSQLQRTAPTD
VDIKLVVEESPDTISVEQQFEIACKLKNFGSSKMEAKLFLTSSSSSLLWC
GISGKVLGPLPPNSSLEFKLHGIATRPGLHSIGGVRILDMNSTKMHDFDD
ICQLLVYTNEQSPFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014798XLOC_014798Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026352TCONS_00026352Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR010378DUF974
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 69..167
e-value: 0.0022
score: 17.8
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 286..385
e-value: 0.21
score: 11.2
IPR010378Protein of unknown function DUF974PFAMPF06159DUF974coord: 65..295
e-value: 2.3E-71
score: 240.4

Blast
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BLAST of TCONS_00026352-protein vs. Swiss-Prot (Human)
Match: TPC13 (Trafficking protein particle complex subunit 13 OS=Homo sapiens GN=TRAPPC13 PE=1 SV=2)

HSP 1 Score: 394.815 bits (1013), Expect = 1.232e-135
Identity = 207/411 (50.36%), Postives = 282/411 (68.61%), Query Frame = 0 
Query:    7 EKEHLLSLKVMRLTKPSVKPLLHVTNEPQDLPGDIFNNSIFTDVATTKGAEMLNCGELLSLPQAFGSIYLGETFSCYVSILNDSNQVTKDVTLKTDIQTSSQRFQLTASTPRDL-LSPDESQDEVLSYEVKELGTHILICAVSYTSPNGEKLFMRRFYKFQVLKPLEVKTKFYNGE------FDSVFLEAQVQNITTNPISMDHVTLDPSQYYMVLPLNELTPVGEETMEKGVDEIFDSTYINPMDMRQYLYKLIPKESHKLELRAMP-MSPIGKLDIVWRTNFGEIGRLQTSQLQRTAPTDVDIKLVVEESPDTISVEQQFEIACKLKNFGSSKMEAKLFLTSSSSSLLWCGISGKVLGPLPPNSSLEFKLHGIATRPGLHSIGGVRILDMNSTKMHDFDDICQLLVYTN 409
            ++EHLL+LKVMRLTKP++   + VT E +DLPGD+FN  +  D +T  GAE+L  GE+L+LPQ FG+I+LGETFS Y+S+ NDSNQV KD+ +K D+QTSSQR  L+AS      L PD   D+V+ +EVKE+GTHIL+CAVSYT+  GEK++ R+F+KFQVLKPL+VKTKFYN E       D VFLEAQ+QN+TT+P+ M+ V+L+PS  Y V  LN ++  GE      V       Y+ PMD RQYLY L PK     +   +  ++ IGKLDIVW+TN GE GRLQTSQLQR AP   D++L +E  PDT+++E+ F I CK+ N     M+  L +  +++S+ WCGISG+ LG L P+SSL   L  +++  GL SI G+R+ D    + +++DDI Q+ V ++
Sbjct:    7 KQEHLLALKVMRLTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNGAEVLMLGEMLTLPQNFGNIFLGETFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVAELKPDCCIDDVIHHEVKEIGTHILVCAVSYTTQAGEKMYFRKFFKFQVLKPLDVKTKFYNAESDLSSVTDEVFLEAQIQNMTTSPMFMEKVSLEPSIMYNVTELNSVSQAGE-----CVSTFGSRAYLQPMDTRQYLYCLKPKNEFAEKAGIIKGVTVIGKLDIVWKTNLGERGRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCSERTMDLVLEM-CNTNSIHWCGISGRQLGKLHPSSSLCLALTLLSSVQGLQSISGLRLTDTFLKRTYEYDDIAQVCVVSS 411
The following BLAST results are available for this feature:
BLAST of TCONS_00026352-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TPC131.232e-13550.36Trafficking protein particle complex subunit 13 OS... [more]
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