TCONS_00026371-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026371-protein
Unique NameTCONS_00026371-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length722

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026371-protein ID=TCONS_00026371-protein|Name=TCONS_00026371-protein|organism=Clytia hemisphaerica|type=polypeptide|length=722bp
MKNTTKTKGETRRRSSRGSISDDPVPTKTAKVDDLKKISENLKTELKKTE
TDKKPEPNNAERKVESLDRRIISLEETEAETRDSARDVTEFQNTCTSIEE
RLSKINELKKEDNETNKELIVNERIEATLLTTNLKKLNRLTQVRGKIAKE
KTQEVKKKVDGLHLDLQNLLYELMHVKKEIQKCMNFSSKDEELDLVDLDK
FYEEAPESVSQPAITKENPHQQMLARLDFEMKKRKELNVSKSEFVEQKKK
TEVEINQKADYLSNLKPRLEQILKASRPVQEYMNIPFEAEAILQEKAQFL
ARPLYVLYIQAKAYKEVCDENLEMDIEGDLMEAKSLFFSDDVTEDNDALS
DISDTETEAEIDENRGGSSRKHAKKDKERLKEQQNKLLQSHPLKISLTIQ
EKDAFKVQLTFHHYPALKINAINVQVTLLSKYESFAKSPLLSSQNILQDL
CCLDTGKTSPNSANTYQMERLKLSAFENHISKLGLPYFWVQWICGLNYLP
NEEITCSLPDAAVSVKHFQKVVRAIKSRVRSRLSLHEQVSSLERLSIREP
QSESMKNILPKKRLLSMLSSWTDASYEDLQNFEEHKMLEDLNVVNEDCIL
YKAAFTRDEVIKVLVVVHTNYPKQTPLLLLSYKDQRNRVNHNADLKCLES
EVNSYAEELLEHGHSNDILSNMLLRLQYCFDIFCETGPSSDTKERLYSRK
RRGRDRQRPYRYNPDGGYFLQR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014807XLOC_014807Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026371TCONS_00026371Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019163THO_Thoc5
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 638..658
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableCOILSCoilCoilcoord: 370..390
NoneNo IPR availableCOILSCoilCoilcoord: 98..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 694..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
IPR019163THO complex, subunit 5PFAMPF09766FimPcoord: 133..497
e-value: 8.2E-105
score: 351.0

Blast
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BLAST of TCONS_00026371-protein vs. Swiss-Prot (Human)
Match: THOC5 (THO complex subunit 5 homolog OS=Homo sapiens GN=THOC5 PE=1 SV=2)

HSP 1 Score: 379.793 bits (974), Expect = 6.602e-122
Identity = 228/659 (34.60%), Postives = 367/659 (55.69%), Query Frame = 0 
Query:   75 EETEAETRDSARDVTEFQNTCTSIEERLSKINELKKEDNETNKELIVNERIEATLLTTNLKKLNRLTQVRGKIAKEKTQEVKKKVDGLHLDLQNLLYELMHVKKEIQKCMNFSSKDEELDLVDLDKFYEEAPESVSQPAITKENPHQQMLARLDFEMKKRKELNVSKSEFVEQKKKTEVEINQKADYLSNLKPRLEQILKASRPVQEYMNIPFEAEAILQEKAQFLARPLYVLYIQAKAYKEVCDENLEMDIEGDLMEAKSLFFSDDVTEDNDALSDISDTETEAEIDENRGGSSRKHAKKDKERLKEQQNKLLQSHPLKISLTIQEKDAFKVQLTFHHYPALKINAINVQV-TLLSKYESFAKSPLLSSQNILQDLCCLDTGKTSPNSANTYQMERLKLSAFENHISKLGLPYFWVQWICGLNYLPNEEITCSLPDAAVSVKHFQKVVRAIKSRVRSRLSLHEQVSSLERLSIREPQSESMKNILPKKRLLSMLSSWTDASYEDLQNFEEHKMLEDLNVVNEDCILYKAAFTRDEV-IKVLVVVHTNYPKQTPLLLLSYKDQRNRVNHNAD-LKCLESEVNSYAEELLEHGHSNDILSNMLLRLQYCFDIFCET--------GPSSDTKERLYSRKRRGRDRQRPYRYNPDGGYFLQR 722
            EE E + RD  RD   ++ TC  ++  +++I +LK    +     I   RI++ +    LKKLNRL  +R K  +++T E K+KVD  HL LQNLLYE+MH++KEI KC+ F SK EE+DLV L++FY+EAP  +S+  +T  +PHQQ LARLD+E+++RK L     E +  K+K   EI  K +YLS+L+PRL  I++AS PVQEY+ +PF+      E A+ L  PLYVL++QA AY + CD+ L + IEG + EAK+LF   + ++D+++ SD  + +T        G            +L +++ ++L+ HPL + L ++ KD   + LTF++   L I  +  +V T +      +   LLS  ++L  L   D GK +PN AN YQ +++ +    +++ +LG PY WVQ + GL++   +     + D ++S  H +  ++ +K+RV+SRL+LH+Q +SLE   +  P +   + + P K ++S L  W   ++ED       K + D  +  +  + Y A   R    ++  VV++  Y    P+  L    +  + N N D ++ +E EVN   +EL     S+ +L+N L RL    D++ ET        GP    +E++  R  RG  R +P++YN   G+F  R
Sbjct:   39 EEAEVDLRDPGRDYELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLG-----------VQLDDKRKEMLKRHPLSVMLDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTAMELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQYQFDKVGILTLSDYVLELGHPYLWVQKLGGLHFPKEQPQQTVIADHSLSASHMETTMKLLKTRVQSRLALHKQFASLEHGIV--PVTSDCQYLFPAK-VVSRLVKWVTVAHEDYMELHFTKDIVDAGLAGDTNLYYMALIERGTAKLQAAVVLNPGYSSIPPVFQLCLNWKGEKTNSNDDNIRAMEGEVNVCYKELCGPWPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR 683
The following BLAST results are available for this feature:
BLAST of TCONS_00026371-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THOC56.602e-12234.60THO complex subunit 5 homolog OS=Homo sapiens GN=T... [more]
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