TCONS_00026406-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00026406-protein
Unique NameTCONS_00026406-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length512

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00026406-protein ID=TCONS_00026406-protein|Name=TCONS_00026406-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
MFRNMAAETLKNYRKLDIFAKHKIPPTLLNEVVESAKDWAISHGLVMKFK
ENPTLSKHAPFVLFPSPFPTYLYNEAFQVQKDFQTLFHRASLDHEFIKDS
LKSVIIHDEFTKLQYDLYEIVRQEGIKPKIYFDIARSDYMIDQVKTEYDS
SKPLTEERPYEIKQIEMNMIAASFSGLSSSMPSLHRYIASELEEHSPFNK
EKVSMRVPINGLGEGMAQAFELYGNENAVVLFIIETIDLNRFDQKQLTYA
FHEGCQKLGLKKRVRCLFRTFEQVAQNGKLDGDRRLILENKEVAITYFRT
GYTPCGLSTEERIGCRLMMERSRSIKCPTIAMQLINTKKVQQVLAKPGMV
EKFIHDENAVQRIRKTFAGLYSLDEGLEGDQIIEDALKAPSNFVLKPQRE
GGGNNLYDQEMVDELRRISNDPEERSQYILMERIRPPVVHSYIVRPESLN
PMESEIVSELGILGVIMSDGDDIIQNESCGHLLKSKDWQRGLKWSISTIR
NLLRPPPHLIDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_014827XLOC_014827Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00026406TCONS_00026406Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004887Glutathione_synth_subst-bd_euk
IPR014042Glutathione_synthase_a-hlx_euk
IPR005615Glutathione_synthase
IPR014049Glutathione_synthase_N_euk
IPR014709Glutathione_synthase_dom
IPR016185PreATP-grasp_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004363glutathione synthase activity
GO:0005524ATP binding
GO:0016874ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006750glutathione biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006750 glutathione biosynthetic process
molecular_function GO:0005524 ATP binding
molecular_function GO:0004363 glutathione synthase activity
molecular_function GO:0016874 ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004887Glutathione synthase, substrate-binding, eukaryoticGENE3D3.40.50.1760coord: 175..317
e-value: 1.5E-31
score: 109.0
IPR004887Glutathione synthase, substrate-binding, eukaryoticPFAMPF03199GSH_synthasecoord: 228..334
e-value: 1.1E-23
score: 83.6
IPR014042Glutathione synthase, alpha-helical, eukaryoticGENE3D1.10.1080.10coord: 318..369
e-value: 2.2E-15
score: 56.2
coord: 92..174
e-value: 6.0E-11
score: 42.0
IPR005615Glutathione synthasePFAMPF03917GSH_synth_ATPcoord: 28..487
e-value: 9.7E-112
score: 373.3
IPR005615Glutathione synthaseTIGRFAMTIGR01986TIGR01986coord: 29..487
e-value: 4.6E-127
score: 422.4
IPR005615Glutathione synthasePIRSFPIRSF001558GSHasecoord: 8..490
e-value: 4.2E-141
score: 468.6
IPR014049Glutathione synthase, N-terminal, eukaryoticGENE3D3.30.1490.80coord: 26..91
e-value: 3.4E-20
score: 71.0
IPR014709Glutathione synthase domainGENE3D3.30.1490.50coord: 370..437
e-value: 1.1E-25
score: 89.1
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 27..228
coord: 338..488
IPR016185Pre-ATP-grasp domainSUPERFAMILY52440PreATP-grasp domaincoord: 227..337

Blast
[Close]
BLAST of TCONS_00026406-protein vs. Swiss-Prot (Human)
Match: GSHB (Glutathione synthetase OS=Homo sapiens GN=GSS PE=1 SV=1)

HSP 1 Score: 350.132 bits (897), Expect = 6.407e-116
Identity = 196/462 (42.42%), Postives = 281/462 (60.82%), Query Frame = 0 
Query:   29 LNEVVESAKDWAISHGLVMKFKENPTLSK---HAPFVLFPSPFPTYLYNEAFQVQKDFQTLFHRASLDHEFIKDSLKSVIIHDEFTKLQYDLYEIVRQEGIKPKIYFDIARSDYMIDQVKTEYDSSKPLTEERPYEIKQIEMNMIAASFSGLSSSMPSLHRYIASELEEHSPFNKEKVSMRVPINGLGEGMAQAFELYGNENAVVLFIIETIDLNRFDQKQLTYAFHEGCQKLGLKKRVRCLFRTFEQVAQNGKLDGDRRLILENKEVAITYFRTGYTPCGLSTEERIGCRLMMERSRSIKCPTIAMQLINTKKVQQVLAKPGMVEKFIHDE-NAVQRIRKTFAGLYSLDEGLEGDQIIEDALKAPSNFVLKPQREGGGNNLYDQEMVDELRRISNDPEERSQYILMERIRPPVVHSYIVRPESLNPMESEIVSELGILGVIMSDGDDIIQNESCGHLLKSK 486
            L E+   A D A++ G++++  + PT S+   +APF LFPS  P+ L  +A+ VQ DF  L    S +  F++ +L S I  D+FT   +D+++ V +EGI   ++  + RSDYM  +     D S  L        KQIE+N I+ASF GL+S  P++HR++ S L +       K+    P  GL  G+A+A+ELYG+ NA+VL I +  + N FDQ+ +            L + +  + RTFE +++ G LD DRRL ++ +E+A+ YFR GY P   S +     RL++ERS + KCP IA QL  TKKVQQ L++PGM+E  +  +  AV R+R TFAGLYSLD G EGDQ I +AL APS FVLKPQREGGGNNLY +EMV  L+++  D EER+ YILME+I P    + ++RP S   +  + +SELGI GV +     ++ N+  GHLL++K
Sbjct:   15 LEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQR---SADGSPAL--------KQIEINTISASFGGLASRTPAVHRHVLSVLSKTK--EAGKILSNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENEL--------LARNIHVIRRTFEDISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQN-WEARLLLERSHAAKCPDIATQLAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQL-KDSEERASYILMEKIEPEPFENCLLRPGSPARV-VQCISELGIFGVYVRQEKTLVMNKHVGHLLRTK 452
The following BLAST results are available for this feature:
BLAST of TCONS_00026406-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSHB6.407e-11642.42Glutathione synthetase OS=Homo sapiens GN=GSS PE=1... [more]
back to top