TCONS_00027048-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027048-protein
Unique NameTCONS_00027048-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length782

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027048-protein ID=TCONS_00027048-protein|Name=TCONS_00027048-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
IDIVETSSVLSPHPCNTGDHLPVTISLKTSCLQVSPETQPSLNTPTTVPK
FMWKNSLFIEKYKEKVKEHLTNSHEHNSTIDTEMKDFFDILKYSAYESFI
ELEQNHHKITPKTWWNSDLSKTRKLVQQMFNIWKSEGFPREVTNVSYNRF
KFARKHFRQQVRNAKHQSTVDYYIDIDKLKKTKPKTYWKTLKVHKSQNSQ
KLFTINGKMSKPEIITELSNHFNSVLNKPGIETVDNTKSNKQLREILNHL
PSSETVYVSQSEVEEAIGQLNKDKTPDPFHILSEHFIYAMSKEFLQHITY
LINRIFSGDIASSLSLSVIIPLVKSNNKSLKDPNNYRGISIIPTLSKLLE
VIIIDKCPTLKSTHPSQFGFTNHSSTVHAELLLQDTIKYYNQNRSPLYIC
SLDVAKAFDSCNWNTLFTKLLNRESTPKPILKYLISSYLNSESLVAYGGL
KSNSFKLSQGVKQGSIISPYLFNLYTEDLLSEIRHSNHGTYLPDGTSMSV
VAFADDLILISPTLCGLQQLIDTCVRYGRSHNLKFNTTKTQYLISGTSAL
PDKSIILDGEQIEPQDKLKHLGFLWKKSISILQLHSHLDYRISEMWSVTS
SLISGGVRYLHPNQIIDIYKTLVIPKLLYGLELIKFKNCHWDQINRQSRC
ALKAMLGVSKHAKNHLHQLYKISDIKVILYNRKMNLVNQMLVNVNTRDYA
LSVMALDKNDRTYSVVDEINDICLENNINFLDCILNRKCHRIKSFFPSES
EEQLELKNCIENWYNPDLRVKFRTILESAIPR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015196XLOC_015196Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027048TCONS_00027048Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 331..573
e-value: 1.4E-37
score: 129.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 303..575
score: 18.92
NoneNo IPR availableGENE3D3.30.70.270coord: 54..573
e-value: 5.0E-24
score: 84.4
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 317..574
e-value: 1.11459E-44
score: 159.379
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 264..544

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027048-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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