TCONS_00027170-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027170-protein
Unique NameTCONS_00027170-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length763

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027170-protein ID=TCONS_00027170-protein|Name=TCONS_00027170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=763bp
MLITLVFVASLLVSQSLAGGPALFAANNAGILTFEVGTPAQAYGPWEYCP
YDSVVEAFGVYYVQDQGATGVRLVCKDSKLRAASTFTKVSARSQNSDVCA
GDGITGFRAMESSDTGILQMQAFCNGNETKIYEVPLPGGFLSSTTFSANQ
SCPVGHRICGLSTSVDAAKGLEGVKFSCCAIASDTAGETSETCDFTPAEE
YCTWQTDSFNAQFGPSSFKKINFFENVTTYLRKDYGTKNGAQGTPGEFVY
FFSDSQSTAFASSSNPVYDPIAAKYFNGSSYGNGATRDPKFTFSFWAGDS
DHTQLCFQVYDVATNNVIQEQILFNNLANDQNYYNAYHEESPLDKSWHTV
TFPIHAKDSFKFKFEVSLLKTTGFGINNFGLDAFNYVQKSAGDCVSPGCH
DNATCTNTTDIVGFSCECLPGFNGTGANVTDGCVEIMPCDDQSLCAVNVS
GVLTNNVCNHAGPGNYTCDCASAFWTLSADNSTCVDIDECALNSTFCGSN
TTTNCTNMVGNYSCACLPDHTRVSPWDQLYDLNCAVNGGWTEWTAPGVQY
ECSATCGDAGVYNATRNCTNPTPDTDGAPCVGVAYNETYPCNRFTCPQSC
PVWKNCTSCNGTQIFQEGGALNMTLTYFDGLSANDLSWAMEQLSRWNQSV
IETICYTAYCNVTSLNSSIALIDVDVTKVQMLSDKTSEAQVAMRNILDCN
PDTDGGHNEWLWEIFDKLCEYKAFLPSIHEDMNIKMGMLSAERDRCMGRS
TLRSLIEVMYRKW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015276XLOC_015276Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027170TCONS_00027170Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR024731EGF_dom
IPR000884TSP1_rpt
IPR018097EGF_Ca-bd_CS
IPR005515VOMI
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 486..535
e-value: 2.6E-5
score: 33.7
coord: 393..434
e-value: 0.23
score: 7.0
IPR000742EGF-like domainSMARTSM00181egf_5coord: 489..535
e-value: 47.0
score: 8.3
coord: 393..434
e-value: 0.011
score: 24.9
coord: 438..485
e-value: 65.0
score: 6.7
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 390..428
score: 12.702
NoneNo IPR availableGENE3D2.10.25.10coord: 489..534
e-value: 6.5E-7
score: 28.8
NoneNo IPR availableGENE3D2.10.25.10coord: 388..441
e-value: 4.0E-7
score: 29.7
NoneNo IPR availableGENE3D2.10.25.10coord: 444..488
e-value: 6.5E-7
score: 28.9
NoneNo IPR availableCDDcd00054EGF_CAcoord: 486..521
e-value: 0.00903654
score: 33.7642
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 478..521
IPR024731EGF domainPFAMPF12947EGF_3coord: 398..427
e-value: 9.7E-7
score: 28.8
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 535..596
e-value: 2.6E-8
score: 33.5
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 534..597
score: 8.834
IPR000884Thrombospondin type-1 (TSP1) repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 534..596
IPR018097EGF-like calcium-binding, conserved sitePROSITEPS01187EGF_CAcoord: 486..514
IPR005515Vitelline membrane outer layer protein I (VOMI)SUPERFAMILY51092Vitelline membrane outer protein-I (VMO-I)coord: 41..179

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027170-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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