TCONS_00027798-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027798-protein
Unique NameTCONS_00027798-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length293

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027798-protein ID=TCONS_00027798-protein|Name=TCONS_00027798-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
YRKPVSDPNNYRGISLIPIITKLIEKIIVNKCPQLKDHKNAQFGFASDAS
TLHAEFLINDTILKYNTEGTPVYICSLDAEKAFDSCNWYQLFDKLHQNNT
LPKLVIRFLINLYMNGEANTKYKGTVSNSFTLSQGVRQGSIISPYLYNLY
TEELIQRIQNLSIGTYLPPGINTSIIVFADDIILMSPNLYQLQYMIDECV
RFGLPKGIKFNSDKNKTQFVISGISPIDNPVLKMNNETIHPQKKLKHLGF
TWSVHSNHISLLRHRQDRISELWAVTSSLVSSGIRKLHPDTIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015704XLOC_015704Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027798TCONS_00027798Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 5..251
e-value: 6.8E-35
score: 120.5
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..252
score: 18.531
NoneNo IPR availableGENE3D3.30.70.270coord: 29..251
e-value: 1.9E-24
score: 85.8
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 6..251
e-value: 1.43908E-38
score: 135.497
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 4..215

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027798-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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