TCONS_00027920-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027920-protein
Unique NameTCONS_00027920-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length256

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027920-protein ID=TCONS_00027920-protein|Name=TCONS_00027920-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
MKHLKVKWQVLLYIAFIYIKLSDSKVCIASGPCGCKLDDDSAEMDLSPLM
NNAPSPMFSGVDTSTGGFSVSVDLCRTFACLNTNDAMFCAIDAIPSPFVI
GNKLSSFDYDEENDIVTFIYTLTGAAEPATIRIVLHCTQDSGIGKMSDFD
ISGQGSTFKSTLLSKYACWKRSGGGGGSGAKSGGLSKGSILCISLLVISV
VYIVGGILINKYVRKVDESTSLCPNAEFWKVLPGYIKDGFMFTKSKIKKD
KEYEQI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015787XLOC_015787Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027920TCONS_00027920Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009011Man6P_isomerase_rcpt-bd_dom
IPR018939Autophagy-rel_prot_27
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009011Mannose-6-phosphate receptor binding domainGENE3D2.70.130.10coord: 29..173
e-value: 3.4E-7
score: 30.2
IPR018939Autophagy-related protein 27PFAMPF09451ATG27coord: 118..250
e-value: 8.9E-11
score: 42.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027920-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top