TCONS_00027983-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00027983-protein
Unique NameTCONS_00027983-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length216

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00027983-protein ID=TCONS_00027983-protein|Name=TCONS_00027983-protein|organism=Clytia hemisphaerica|type=polypeptide|length=216bp
GKKSKANTIKMATEKKYKLSYFDLRGRGEVPRMIFNYVGVEFEDKRIPFP
EWPAVKSTFPLGFIPVITTPDGTDISQTLACIMYMGDEFSLYGNNASQRG
VINCVVISMKEIHDHCANIAVFLKEEEEKEKVRAILDKKIPIFFKYFEEL
RSQNSSSAFLVSKSITIADFFLVDTLEFISAAMPGRDFLADYPKLKALND
HIRGLDKVKEYLATRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015834XLOC_015834Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00027983TCONS_00027983Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004046GST_C
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1050.10coord: 96..216
e-value: 4.6E-16
score: 58.7
NoneNo IPR availableGENE3D3.40.30.10coord: 15..95
e-value: 1.9E-14
score: 53.1
NoneNo IPR availableSFLDSFLDG01205AMPS.1coord: 15..213
e-value: 0.0
score: 160.0
NoneNo IPR availableSFLDSFLDG00363AMPS_(cytGST):_Alpha-,_Mu-,_Pcoord: 16..214
e-value: 0.0
score: 155.3
NoneNo IPR availableCDDcd03192GST_C_Sigma_likecoord: 101..202
e-value: 1.87777E-11
score: 56.477
NoneNo IPR availableCDDcd03039GST_N_Sigma_likecoord: 17..87
e-value: 5.77789E-20
score: 79.5152
IPR004046Glutathione S-transferase, C-terminalPFAMPF14497GST_C_3coord: 112..215
e-value: 1.3E-18
score: 66.9
IPR004045Glutathione S-transferase, N-terminalPROSITEPS50404GST_NTERcoord: 15..93
score: 20.276
IPR010987Glutathione S-transferase, C-terminal-likePROSITEPS50405GST_CTERcoord: 95..216
score: 14.7
IPR010987Glutathione S-transferase, C-terminal-likeSUPERFAMILY47616GST C-terminal domain-likecoord: 91..215
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 16..89

Blast
[Close]
BLAST of TCONS_00027983-protein vs. Swiss-Prot (Human)
Match: HPGDS (Hematopoietic prostaglandin D synthase OS=Homo sapiens GN=HPGDS PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 3.879e-24
Identity = 57/200 (28.50%), Postives = 102/200 (51.00%), Query Frame = 0 
Query:   17 YKLSYFDLRGRGEVPRMIFNYVGVEFEDKRIPFPEWPAVKSTFPLGFIPVITTPDGTDISQTLACIMYMGDEFSLYGNNASQRGVINCVVISMKEIHDHCANIAVFLKEEEEKEKV-RAILDKKIPIFFKYFEELRSQNSSSAFLVSKSITIADFFLVDTLEFISAAMPGRDFLADYPKLKALNDHIRGLDKVKEYLATR 215
            YKL+YF++RGR E+ R IF Y+ +++ED RI   +WP +KST P G IP++   DG  + Q+LA   Y+     L GN   ++  ++ +V ++    D  +      K+++ KE++   +L    P      ++L +      +L+  S+T ADF+       +    P  D L ++P+L  L   ++ +  V  ++  R
Sbjct:    4 YKLTYFNMRGRAEIIRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEV-DGLTLHQSLAIARYLTKNTDLAGNTEMEQCHVDAIVDTLD---DFMSCFPWAEKKQDVKEQMFNELLTYNAP---HLMQDLDTYLGGREWLIGNSVTWADFYWEICSTTLLVFKP--DLLDNHPRLVTLRKKVQAIPAVANWIKRR 194
The following BLAST results are available for this feature:
BLAST of TCONS_00027983-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HPGDS3.879e-2428.50Hematopoietic prostaglandin D synthase OS=Homo sap... [more]
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