TCONS_00028208-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028208-protein
Unique NameTCONS_00028208-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length202

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028208-protein ID=TCONS_00028208-protein|Name=TCONS_00028208-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
GCMRNQKKNYDVTFFGLPKDNTLAKEWVNRLKTKREDPLPKKVILCESHF
SAEMFDKSVDLQRRFMKERGMKLKQRKLITTAVPDIFPFSSSKQAVKRPN
IMTKIRERQKKNRSAQSQTDHVQPPIQTSDVGTQTREENVTSEELNTIFN
TTALETMADLLGLPSLPSIVRKFYRTHEKDDQNADQNEEKFGSFHQIADS
FD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_015967XLOC_015967Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028208TCONS_00028208Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006612Znf_C2CH
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006612Zinc finger, C2CH-typeSMARTSM00692dm3coord: 14..92
e-value: 1.3E-5
score: 34.6
IPR006612Zinc finger, C2CH-typePFAMPF05485THAPcoord: 1..87
e-value: 2.5E-10
score: 41.1
IPR006612Zinc finger, C2CH-typePROSITEPS50950ZF_THAPcoord: 1..87
score: 14.964
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..140
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 1..90

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028208-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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