TCONS_00028390-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028390-protein
Unique NameTCONS_00028390-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length205

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028390-protein ID=TCONS_00028390-protein|Name=TCONS_00028390-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
MGVFTFSAFVLFLATIPFVTAQNVFNDFAHCGMSAKLNRDFSRIVGGTEA
ERKELPWQAALWGGSGKPYCGGTLISSQYVVTAAHCVDGSSPQYVVLGAH
VFGGGTENNRQVRQVASVISHENYNSQTLANDIALIKLKSPVEYNDYVKP
ACVPESGDAPDPNTEVVISGWGTTQSGGSQPNTLRETKVSVVSRSSCRQS
YGQNA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016085XLOC_016085Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028390TCONS_00028390Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001314Peptidase_S1A
IPR001254Trypsin_dom
IPR018114TRYPSIN_HIS
IPR009003Peptidase_S1_PA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001314Peptidase S1A, chymotrypsin familyPRINTSPR00722CHYMOTRYPSINcoord: 128..142
score: 46.15
coord: 71..86
score: 58.92
IPR001254Serine proteases, trypsin domainSMARTSM00020trypsin_2coord: 43..205
e-value: 2.2E-39
score: 146.9
IPR001254Serine proteases, trypsin domainPFAMPF00089Trypsincoord: 44..203
e-value: 1.1E-46
score: 159.4
IPR001254Serine proteases, trypsin domainPROSITEPS50240TRYPSIN_DOMcoord: 44..205
score: 22.872
IPR001254Serine proteases, trypsin domainCDDcd00190Tryp_SPccoord: 44..204
e-value: 6.00066E-65
score: 201.351
NoneNo IPR availableGENE3D2.40.10.10coord: 43..54
e-value: 8.2E-4
score: 18.6
NoneNo IPR availableGENE3D2.40.10.10coord: 138..205
e-value: 2.7E-24
score: 85.3
NoneNo IPR availableGENE3D2.40.10.10coord: 55..75
e-value: 1.0E-17
score: 63.5
NoneNo IPR availableGENE3D2.40.10.10coord: 76..137
e-value: 2.1E-27
score: 94.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..205
IPR018114Serine proteases, trypsin family, histidine active sitePROSITEPS00134TRYPSIN_HIScoord: 81..86
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 6..203

Blast
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BLAST of TCONS_00028390-protein vs. Swiss-Prot (Human)
Match: TMPS9 (Transmembrane protease serine 9 OS=Homo sapiens GN=TMPRSS9 PE=1 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.413e-32
Identity = 64/188 (34.04%), Postives = 96/188 (51.06%), Query Frame = 0 
Query:   16 IPFVTAQNVFNDFAHCGMSAKLNRDFSRIVGGTEAERKELPWQAALWGGSGKPYCGGTLISSQYVVTAAHCVD--GSSPQYVVLGAHVFGGGTENNRQVRQVASVISHENYNSQTLANDIALIKLKSPVEYNDYVKPACVPESGDAPDPNTEVVISGWGTTQSGGSQPNTLRETKVSVVSRSSCRQSY 201
             P             CG++       +RIVGG+ A R E PWQ +LW    +  CG  L++ +++++AAHC D  G   Q+       F  G E   Q+ +VA +  H  YN  TL  D+AL++L  PV  +  V+P C+PE    P   T  VI+GWG+ + GGS    L++  V ++S  +CR+ Y
Sbjct:  802 FPDAPEATTHTQLPDCGLAPA---ALTRIVGGSAAGRGEWPWQVSLWLRRREHRCGAVLVAERWLLSAAHCFDVYGDPKQWAAFLGTPFLSGAEG--QLERVARIYKHPFYNLYTLDYDVALLELAGPVRRSRLVRPICLPEPAPRPPDGTRCVITGWGSVREGGSMARQLQKAAVRLLSEQTCRRFY 984

HSP 2 Score: 98.9821 bits (245), Expect = 3.890e-24
Identity = 55/183 (30.05%), Postives = 100/183 (54.64%), Query Frame = 0 
Query:   26 NDFAHCGMSAKLN-RDFSRIVGGTEAERKELPWQAALWGGSGKPYCGGTLISSQYVVTAAHCVD--GSSPQYVVLGAHVFGGGTENNRQVRQVASVISHENYNSQTLANDIALIKLKSPVEYNDYVKPACVPESGDAPDPNTEVVISGWGTTQSGG-SQPNTLRETKVSVVSRSSCRQSYGQN 204
            +D AHC    +   R   RIVGG EA   E PWQA+L   + + +CG  +I+++++V+AAHC +      ++V      +  G+E +    QV  ++ H  YN+ T   D+A+++L SP+ +  +++P C+P +     P+ + +ISGWG  +     +P  L++  V ++ ++ C   YG +
Sbjct:  184 SDEAHCECGLQPAWRMAGRIVGGMEASPGEFPWQASL-RENKEHFCGAAIINARWLVSAAHCFNEFQDPTKWVAYVGATYLSGSEASTVRAQVVQIVKHPLYNADTADFDVAVLELTSPLPFGRHIQPVCLPAATHIFPPSKKCLISGWGYLKEDFLVKPEVLQKATVELLDQALCASLYGHS 365

HSP 3 Score: 95.9005 bits (237), Expect = 5.194e-23
Identity = 62/196 (31.63%), Postives = 109/196 (55.61%), Query Frame = 0 
Query:   13 LATIP--FVTAQNVFNDFAHCGMSAKLNRDFSRIVGGTEAERKELPWQAALWGGSGKPYCGGTLISSQYVVTAAHCVDGSSPQYVV--LG-AHVFG-GGTENNRQVRQVASVISHENYNSQTLANDIALIKLKSPVEYNDYVKPACVPESGDAPDPNTEVVISGWGTTQSG-GSQPNTLRETKVSVVSRSSCRQSY 201
            L+T+P  +VT   +      CG    + +  +R+VGG  A   E+PWQ +L  GS + +CG T++  +++++AAHC + +  + V   LG A + G GG+     +R+V   + H  YN   L  D+A+++L SP+ +N Y++P C+P +        + +ISGWG TQ G  ++P  L++  V ++ + +C   Y
Sbjct:  476 LSTVPLDWVTVPKL----QECGARPAMEKP-TRVVGGFGAASGEVPWQVSLKEGS-RHFCGATVVGDRWLLSAAHCFNHTKVEQVRAHLGTASLLGLGGSPVKIGLRRV---VLHPLYNPGILDFDLAVLELASPLAFNKYIQPVCLPLAIQKFPVGRKCMISGWGNTQEGNATKPELLQKASVGIIDQKTCSVLY 662
The following BLAST results are available for this feature:
BLAST of TCONS_00028390-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TMPS91.413e-3234.04Transmembrane protease serine 9 OS=Homo sapiens GN... [more]
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