TCONS_00028589-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028589-protein
Unique NameTCONS_00028589-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length540

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028589-protein ID=TCONS_00028589-protein|Name=TCONS_00028589-protein|organism=Clytia hemisphaerica|type=polypeptide|length=540bp
LAATNQIIIPYLSKMLNSSNMAGFFTKSISQIIGSSYYNKTPEAGSQYIL
GTSPPDGSMELYILGTSPPDGSMELYILDNKLQVCSCPREKIPLLCHSII
RMALLPDSSPSFFSLTEAENMTLILTEEDFKQLPENVELETSGQVWRVLT
VSVGALGSFNEIMGVSKIAKSAIGPLADHNVSVLXLGSFNEIMGVSKIAK
SAIGPLADHNVSVLCLSTYQSDYILVQESQLNEAIQCLSSYFKIFNEDHQ
RVSESKATTPLSPTPRKSRPIVHPYQSPDKIFHIAGLDASKLSGVVQVLL
ELMFFPKTSGEEFSFFHFTIVHGDISLVLDDDSFNKFPKNTLYSSQSSKD
GNWKIISIGEQPLGFVECGIVAQVVEPLASSQVSSYYLSTYDIEYCMVHE
TDYEKAKETFEKLKLENFSDQEDTPEASPTDSPDENENTETAESSTDNNA
DIRPGENMSLSESLDNIHHAYPSALHEANYSRSPLTPTSECSSYGTSPLS
DVDIATATSSTSNTSTSVPTDPIPIPSSTCLRDSITRLKC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016212XLOC_016212Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028589TCONS_00028589Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026249GATS-like
IPR027795GATS-like_ACT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
NoneNo IPR availableGENE3D3.30.2130.10coord: 272..416
e-value: 1.9E-18
score: 66.2
NoneNo IPR availableGENE3D3.30.2130.10coord: 189..253
e-value: 2.3E-12
score: 46.5
coord: 70..188
e-value: 2.8E-13
score: 49.5
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 195..242
NoneNo IPR availableSUPERFAMILY55021ACT-likecoord: 353..413
IPR026249GATS-like familyPRINTSPR02078GATSLIKEFMLYcoord: 126..140
score: 41.33
coord: 163..182
score: 67.0
coord: 140..152
score: 30.38
IPR027795GATS-like ACT domainPFAMPF13840ACT_7coord: 351..409
e-value: 3.9E-12
score: 45.7
coord: 193..239
e-value: 1.3E-13
score: 50.4

Blast
[Close]
BLAST of TCONS_00028589-protein vs. Swiss-Prot (Human)
Match: CAST2 (Cytosolic arginine sensor for mTORC1 subunit 2 OS=Homo sapiens GN=CASTOR2 PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 2.999e-62
Identity = 128/342 (37.43%), Postives = 187/342 (54.68%), Query Frame = 0 
Query:   73 MELYILDNKLQVCSCPREKIPLLCHSIIRMALLPDSSP-SFFSLTEA-ENMTLILTEEDFKQLPENVELETSGQVWRVLTVSVGALGSFNEIMGVSKIAKSAIGPLADHNVSVLXLGSFNEIMGVSKIAKSAIGPLADHNVSVLCLSTYQSDYILVQESQLNEAIQCLSSYFKIFN--EDHQRVSESKATTPLSPTPR-KSRPIVHPYQSPDKIFHIAGLDASKLSGVVQVLLELMFF------PKTSGEE---FSFFHFTIVHGDISLVLDDDSFNKFPKNTLYSSQSSKDGNWKIISIGEQPLGFVECGIVAQVVEPLASSQVSSYYLSTYDIEYCMVHE 400
            MEL+IL+++LQV S  +E IPL  + +I++A L   +   FFSLTE  E+ T+I+ EE F +LP +  L  +   W  L V                             VS     S ++ +GV+KIAKS I PLAD N+SV  LSTYQ+D+ILV+E  L      LSS F I          +E+   T     P+   RP++HP  SP   F +  LD   L  V  +L+++MF+      P  +G++     FF F+++ G ISLV+D  +  +FP N L++S S +   WK++ IG QPLGF ECGIVAQ+ EPLA++ + +YY+ST+  ++ +V E
Sbjct:    1 MELHILEHRLQVASVAKESIPLFTYGLIKLAFLSSKTRCKFFSLTETPEDYTIIVDEEGFLELPSSEHLSVADATWLALNV-----------------------------VSGGGSFSSSQPIGVTKIAKSVIAPLADQNISVFMLSTYQTDFILVRERDLPFVTHTLSSEFTILRVVNGETVAAENLGITNGFVKPKLVQRPVIHPLSSPSNRFCVTSLDPDTLPAVATLLMDVMFYSNGVKDPMATGDDCGHIRFFSFSLIEGYISLVMDVQTQQRFPSNLLFTSASGE--LWKMVRIGGQPLGFDECGIVAQISEPLAAADIPAYYISTFKFDHALVPE 311
The following BLAST results are available for this feature:
BLAST of TCONS_00028589-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAST22.999e-6237.43Cytosolic arginine sensor for mTORC1 subunit 2 OS=... [more]
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