TCONS_00028590-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028590-protein
Unique NameTCONS_00028590-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028590-protein ID=TCONS_00028590-protein|Name=TCONS_00028590-protein|organism=Clytia hemisphaerica|type=polypeptide|length=313bp
MSECIAQQEEIIHQENIKHISWDDLDKRKYYTIGPTIMLGVRIIVYPPML
IKTRLQVQKHKSNYNGTLDAFRKIYKYEGIRGYYKGFGTSTLSMFSGQIY
ITTFEVIREKAPTSQASKSLIAGTVASLAGQTLTVPIDIISQKQMMYGQR
IQKDGQPKLTSAYSVAQKIFRQNGLRGFYKGYVASILTYTPNSGIWWAAY
YKFTQFYGSMRPAGTPDMVIQGMSGPSAAIVASWLTNPNDIIRTRLQVEG
GKDTIKTTLLKLIKEEGVLSLWTKGLTARFLSAIPSGFFLSVSYELVKKL
SMKPEAKMKQCDG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016213XLOC_016213Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028590TCONS_00028590Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018108Mitochondrial_sb/sol_carrier
IPR023395Mt_carrier_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018108Mitochondrial substrate/solute carrierPFAMPF00153Mito_carrcoord: 42..110
e-value: 1.0E-14
score: 54.1
coord: 115..207
e-value: 6.6E-15
score: 54.7
coord: 220..303
e-value: 1.0E-12
score: 47.7
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 216..300
score: 14.404
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 27..110
score: 15.627
IPR018108Mitochondrial substrate/solute carrierPROSITEPS50920SOLCARcoord: 114..206
score: 17.321
IPR023395Mitochondrial carrier domainGENE3D1.50.40.10coord: 41..301
e-value: 5.4E-55
score: 185.7
IPR023395Mitochondrial carrier domainSUPERFAMILY103506Mitochondrial carriercoord: 24..296

Blast
[Close]
BLAST of TCONS_00028590-protein vs. Swiss-Prot (Human)
Match: S2544 (Solute carrier family 25 member 44 OS=Homo sapiens GN=SLC25A44 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 3.253e-88
Identity = 145/306 (47.39%), Postives = 200/306 (65.36%), Query Frame = 0 
Query:   14 QENIKHISWDDLDKRKYYTIGPTIMLGVRIIVYPPMLIKTRLQVQKHKSNYNGTLDAFRKIYKYEGIRGYYKGFGTSTLSMFSGQIYITTFEVIRE-KAPTSQAS--KSLIAGTVASLAGQTLTVPIDIISQKQMMYGQ-----RIQKDGQPKLTSAYSVAQ------KIFRQNGLRGFYKGYVASILTYTPNSGIWWAAYYKFTQFYGSMRPAGTPDMVIQGMSGPSAAIVASWLTNPNDIIRTRLQVEGGKDTIKTTLLKLIKEEGVLSLWTKGLTARFLSAIPSGFFLSVSYELVKKLSMKPE 305
            + NI+ I W+ LDK+K+Y  G  + + +R+ VYP  LI+TRLQVQK KS Y+GT DAF KI + +GI G Y+GF  +T ++ SGQ Y+TT+E+ R+  A  SQ++  KSL+AG  ASL  Q++TVPID++SQ  MM  +     R Q  G P+     +  Q      +I + +GLRGFY+GYVAS+LTY PNS +WW  Y+ + +    + P   P +V Q +SGP AA  AS LTNP D+IRTR+QVE GK++I  T  +L+ EEG   L  KGL+AR +SA PS   + V YE +KKLS++PE
Sbjct:    4 KRNIQIIEWEHLDKKKFYVFGVAMTMMIRVSVYPFTLIRTRLQVQKGKSLYHGTFDAFIKILRADGITGLYRGFLVNTFTLISGQCYVTTYELTRKFVADYSQSNTVKSLVAGGSASLVAQSITVPIDVVSQHLMMQRKGEKMGRFQVRGNPEGQGVVAFGQTKDIIRQILQADGLRGFYRGYVASLLTYIPNSAVWWPFYHFYAEQLSYLCPKECPHIVFQAVSGPLAAATASILTNPMDVIRTRVQVE-GKNSIILTFRQLMAEEGPWGL-MKGLSARIISATPSTIVIVVGYESLKKLSLRPE 307
The following BLAST results are available for this feature:
BLAST of TCONS_00028590-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S25443.253e-8847.39Solute carrier family 25 member 44 OS=Homo sapiens... [more]
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