TCONS_00028598-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028598-protein
Unique Name	TCONS_00028598-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	918

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028598-protein ID=TCONS_00028598-protein|Name=TCONS_00028598-protein|organism=Clytia hemisphaerica|type=polypeptide|length=918bp
EKTENCILIYFYITRVKCKKGISRVMSSETVKQDETSRKESNVRVVVRVR
PPNERELSQGKCNVVKVVDNFMLTFDPKENDQFGGTQKRCSILDKKMRDL
NFMFDRVFDDQATNEDVFQHTTKPVIESVLQGFNCSVFAYGATSAGKTHT
MLGSPNQPGVIFLTMMELYKSLMAIDEQFETDISVSYLEIYNETCKDLLL
PTGPLAVREDPEKGVCVAGLSLHKPRSAEELLEMLHFGNQNRTQHPTDAN
KQSSRSHAVFQVFVKQLPKASGITASVKIAKISLIDLAGSERATVTTNHG
ERLREGANINKSLLALGNCINALAENKNNLHVPYRNSKLTRLLKDSLGGN
CKTIMIAAVSPSTLSYEDTYNTLKYANRAKNIKSNLTSNTINVDFHVTQY
AKIVEDLKNQIALLQKKLEENKTSEFCEDEKKKNKSVEAEEELLKFSEEL
RELFQEQKTFVKQLIDVEATEKELTIKLKHKERSFKRLEIIKTLSGQSLE
PACQKLETLRNQTLFKQSQLAEQSNRLKASLNTNNEQIQSLQHVIDEWAN
QRTDGIRNRVNFMYESLTTDVNSMSFSTKYKHAKRHLTLQDNDQKNNEKL
ISQLLEIITAQQNKINGNQSGTPARRQLTNQIEELPNSLLFDGPKITWAD
QTLVTDTENQDPQNMVDSNVNFYLDFKSCTPLKTPSRKPSVLRRIVQQSR
GHDNDTTLNTTLNTGPVRSFKQPSITIYEPNKHSDNVNETFSISSLPLNS
TYIRDTEIDVHDDEERRKTFILSTPHAKTQRPHSLVEYPETPSPEENGEY
AKSYIPVRPPLKEKDKNTVKNGMTSFFKSPRMRSFTEGNGTKLKKQDRTF
TVPKFNKKRHADIGMPVRSTSTLSLHKENVKPKNKSRTLRPSQSLISLNS
ASQTSMKSSKQNKGRFRF

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_016220	XLOC_016220	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028598	TCONS_00028598	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001752	Kinesin_motor_dom
IPR019821	Kinesin_motor_CS
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007018	microtubule-based movement
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0003777	microtubule motor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 531..551
None	No IPR available	COILS	Coil	Coil	coord: 397..424
None	No IPR available	COILS	Coil	Coil	coord: 436..457
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 775..800
None	No IPR available	CDD	cd01370	KISc_KIP3_like	coord: 51..382 e-value: 2.57955E-176 score: 516.512
IPR001752	Kinesin motor domain	PRINTS	PR00380	KINESINHEAVY	coord: 247..264 score: 52.55 coord: 132..153 score: 59.89 coord: 281..299 score: 50.57 coord: 332..353 score: 68.79
IPR001752	Kinesin motor domain	SMART	SM00129	kinesin_4	coord: 40..390 e-value: 1.3E-161 score: 552.9
IPR001752	Kinesin motor domain	GENE3D	3.40.850.10		coord: 34..396 e-value: 1.3E-128 score: 428.1
IPR001752	Kinesin motor domain	PFAM	PF00225	Kinesin	coord: 48..382 e-value: 2.0E-113 score: 378.6
IPR001752	Kinesin motor domain	PROSITE	PS50067	KINESIN_MOTOR_2	coord: 42..382 score: 121.092
IPR019821	Kinesin motor domain, conserved site	PROSITE	PS00411	KINESIN_MOTOR_1	coord: 280..291
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 42..418

Blast

[Close]

BLAST of TCONS_00028598-protein vs. Swiss-Prot (Human)
Match: KI18A (Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2)

HSP 1 Score: 484.567 bits (1246), Expect = 3.202e-157
Identity = 282/635 (44.41%), Postives = 397/635 (62.52%), Query Frame = 0

Query:   42 NVRVVVRVRPPNERELSQGKCNVVKVVDNFMLTFDPKENDQ---FGGTQKRCSILDKKMRDLNFMFDRVFDDQATNEDVFQHTTKPVIESVLQGFNCSVFAYGATSAGKTHTMLGSPNQPGVIFLTMMELYKSLMAIDEQFETDISVSYLEIYNETCKDLLLPTGPLAVREDPEKGVCVAGLSLHKPRSAEELLEMLHFGNQNRTQHPTDANKQSSRSHAVFQVFVKQLPKASGITASVKIAKISLIDLAGSERATVTTNHGERLREGANINKSLLALGNCINALAENK-NNLHVPYRNSKLTRLLKDSLGGNCKTIMIAAVSPSTLSYEDTYNTLKYANRAKNIKSNLTSNTINVDFHVTQYAKIVEDLKNQIALLQKKL---EENKTSEFCEDEKKKNKSVEAEEELLKFSEELRELFQEQKTFVKQLIDVEATEKELTIKLKHKERSFKRLEIIKTLSGQSLEPACQKLETLRNQTLFKQSQLAEQSNRLKASLNTNNEQIQSLQHVIDEWANQRTDGIRNRVNFMYESLTTDVNSMSFSTKYKHAK---RHL----TLQDNDQKNNEKLISQLLEIITAQQNKINGNQSGTPARRQLTNQIEELPNSLLFDGPKITWADQTLVTDTENQDP 662
            +++VVVRVRP N +E + G   VV VVD  +L FDPK+ +     G      +++ K+ +DL F+FD VFD+ +T  +VF+HTTKP++ S L G+NC+V AYGAT AGKTHTMLGS ++PGV++LTM+ LYK +  I E+     +VSYLE+YNE  +DLL+ +GPLAVRED +KGV V GL+LH+P+S+EE+L +L  GN+NRTQHPTD N  SSRSHAVFQ++++Q  K + I  +V+IAK+SLIDLAGSERA+ +   G R  EG NIN+SLLALGN INALA++K  N H+PYRNSKLTRLLKDSLGGNC+TIMIAAVSPS++ Y+DTYNTLKYANRAK+IKS+L SN +NV+ H+TQY KI  + K +I LL++KL   EE K      D+ K   S   E+E+ +F E L  LFQ ++   ++ + +E   KE  +K  ++++  K++E++   S   +E A  K +        ++S L +   R +  L   +E    L  V  E       G+ ++   + + L  D++      + K  K   RH+     LQ+   +  E +++ LL  +  Q   +        A      +IE     L+     + WADQT     +N  P
Sbjct:   11 HMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKKQNKDLKFVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNSGPLAVREDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDIKSSLKSNVLNVNNHITQYVKICNEQKAEILLLKEKLKAYEEQKAFTNENDQAKLMISNPQEKEIERFQEILNCLFQNREEIRQEYLKLEMLLKENELKSFYQQQCHKQIEMM--CSEDKVEKATGKRDHRLAMLKTRRSYLEK---RREEELKQFDENTNWLHRVEKEM------GLLSQNGHIPKELKKDLHCHHLHLQNKDLKAQIRHMMDLACLQEQQHRQTEAVLNALLPTLRKQYCTLKEAGLSNAAFESDFKEIEH----LVERKKVVVWADQTAEQPKQNDLP 630

The following BLAST results are available for this feature:

BLAST of TCONS_00028598-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028598-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
KI18A	3.202e-157	44.41	Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF...	[more]

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TCONS_00028598-protein (polypeptide) - C. hemisphaerica