TCONS_00028753-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028753-protein
Unique NameTCONS_00028753-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length219

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028753-protein ID=TCONS_00028753-protein|Name=TCONS_00028753-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
MKTNEKGTLPVNSLIEDQDIFYMKQALKLSKETLERREVPIACLIVYKNN
VIARGSNDVNRTKNATRHAELLAIEEVREYAKTESLDVTQVFKDSTLYVT
TEPCVMCAAALRLVGLTNVVYGCGNQRFGGCGSRLDAHSRMPRNNTTEEV
PPVAKRLKMDALSGSCLIAMGDPLVCRTGIMADEAVNMLKLFYAGENPNA
PNPKDKSGRMEALRKEKES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016310XLOC_016310Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028753TCONS_00028753Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002125CMP_dCMP_dom
IPR016192APOBEC/CMP_deaminase_Zn-bd
IPR016193Cytidine_deaminase-like
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016787hydrolase activity
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.140.10coord: 12..207
e-value: 7.5E-45
score: 151.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..219
NoneNo IPR availableCDDcd01285nucleoside_deaminasecoord: 23..136
e-value: 5.54263E-35
score: 120.8
IPR002125Cytidine and deoxycytidylate deaminase domainPFAMPF00383dCMP_cyt_deam_1coord: 19..122
e-value: 7.0E-21
score: 73.9
IPR002125Cytidine and deoxycytidylate deaminase domainPROSITEPS51747CYT_DCMP_DEAMINASES_2coord: 17..142
score: 27.192
IPR016192APOBEC/CMP deaminase, zinc-bindingPROSITEPS00903CYT_DCMP_DEAMINASES_1coord: 68..111
IPR016193Cytidine deaminase-likeSUPERFAMILY53927Cytidine deaminase-likecoord: 12..150

Blast
[Close]
BLAST of TCONS_00028753-protein vs. Swiss-Prot (Human)
Match: ADAT2 (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.605e-54
Identity = 86/184 (46.74%), Postives = 117/184 (63.59%), Query Frame = 0 
Query:   22 YMKQALKLSKETLERREVPIACLIVYKNNVIARGSNDVNRTKNATRHAELLAIEEVREYAKTESLDVTQVFKDSTLYVTTEPCVMCAAALRLVGLTNVVYGCGNQRFGGCGSRLD-AHSRMPRNNTTEEVPPVAKRLKMDALSGSCLIAMGDPLVCRTGIMADEAVNMLKLFYAGENPNAPNPK 204
            +M++A+ ++KE LE  EVP+ CL+VY N V+ +G N+VN+TKNATRHAE++AI++V ++ +      ++VF+ + LYVT EPC+MCAAALRL+ +  VVYGC N+RFGGCGS L+ A + +P  NT                        G P  C  G  A+EAV MLK FY  ENPNAP  K
Sbjct:   25 WMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEVFEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASADLP--NT------------------------GRPFQCIPGYRAEEAVEMLKTFYKQENPNAPKSK 182
The following BLAST results are available for this feature:
BLAST of TCONS_00028753-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ADAT24.605e-5446.74tRNA-specific adenosine deaminase 2 OS=Homo sapien... [more]
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