TCONS_00028759-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028759-protein
Unique Name	TCONS_00028759-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	536

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028759-protein ID=TCONS_00028759-protein|Name=TCONS_00028759-protein|organism=Clytia hemisphaerica|type=polypeptide|length=536bp
MSRQSLLASKDDFKYQQVKMAPVKPEEAEVESNQSNKSYQHIISEAIGDM
GRWQAFLIFAHFTPKIVMAWCMIIISFGGAKTDWWKRTMEIDPITNETLY
VNRLKDCSPLGINDSIVYDNTYTITAEWDLICGLDYIPTWIKTSQMVGVM
VGAGVLGQLGDWIGRQKCSWFAFTLSVVFILIQAFSANWIMMLVCAFVVG
IGLGGFLVLNSIYVLEYIGTSWRSAIGFIPFWASGVVILGGLYSLLPNWR
HLCIASAITGAPFIIFMWLTPESIRWLLQHGKTEQAVEVVEKIAKHNKRA
KPDLTDLKAVADQESSKLKENALKYNYMTLFKFKATRWRCPLFGFFWFTC
AYSYYALTFGVSLLSGNPAANMSLMGVGEGCSLIMCWALTKKFGRKYTTV
ILFTCTALSSFVITIGYATKAEDSETIKTVCALVSRLFLSGAWGSLIIYT
VEIFPTMLRSSAYGFVSICGRIGGIVAPQSAPLYDVAKHLPYTINGVLGG
LCALGVLLLHDTATQDLQDKMDEDEEGDLKKEDTTV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_016312	XLOC_016312	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028759	TCONS_00028759	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 115..287 e-value: 1.3E-18 score: 66.5
None	No IPR available	GENE3D	1.20.1250.20		coord: 307..536 e-value: 8.6E-20 score: 70.3
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 139..485 e-value: 7.7E-33 score: 113.9
IPR005829	Sugar transporter, conserved site	PROSITE	PS00217	SUGAR_TRANSPORT_2	coord: 198..223
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 99..514 score: 12.228
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 140..509 e-value: 3.45871E-20 score: 89.6805
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 139..519

Blast

[Close]

BLAST of TCONS_00028759-protein vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.952e-42
Identity = 126/470 (26.81%), Postives = 220/470 (46.81%), Query Frame = 0

Query:   45 EAIGDMGRWQAFLIFA-HFTPKIVMAWCMIIISFGGAKTDWWKRTMEIDPITN--------ETLYVNRLKDCSPLGINDSIVYDNTYT-ITAEWDLICGLDYIPTWIKTSQMVGVMVGAGVLGQLGDWIGRQKCSWFAFTLSVVFILIQAFSANWIMMLVCAFVVGIGLGGFLVLNSIYVLEYIGTSWRSAIGFIP--FWASGVVILGGLYSLLPNWRHLCIASAITGAPFIIFMWLTPESIRWLLQHGKTEQAVEVVEKIAKHNKRAKPDLTDLKAVADQESSKLKENALKYNYMTLFKFKATRWRCPLFGFFWFTCAYSYYALTFGVSLLSGNPAANMSLMGVGEGCSLIMCWALTKK--FGRKYTTVILFTCTALSSFVITIGYATKAEDSETIKTV----CALVSRLFLSGAWGSLIIYTVEIFPTMLRSSAYGFVSICGRIGGIVAPQSAPLYDVAKHLPYTING 496
            +A+G+MG +Q +L F      ++ +A   I+I+  GA   +     E+ P  +        +  + + L   +   I+  + + +++T I +EW LI    Y  +   +    GV VG    GQL D  GR+K     F L ++F +   FS ++    V  F+VG+  GG  ++  + + E +GT++ +  G I   F+A G+     L   + +WR L I   + G    +     PES RWL   G+  +A E +  IAK N++ K   +    +    +   +E     +++ LF+++       +  F WF C+  YY LT     L G+  AN++L G+ E  S  +C  L  +  FGRK T         L+  ++   +  + +D+     V     +L+ +L +S A+  + IYT E++PT++R+   G  S+  R+GGI+AP    L  V   LP+ + G
Sbjct:    8 QAVGEMGIYQMYLCFLLAVLLQLYVATEAILIALVGATPSYHWDLAELLPNQSHGNQSAGEDQAFGDWLLTANGSEIHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTFS----LTHPANRSCRETG---SFLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLINQKWFGRKRTLSAFLCLGGLACLIVM--FLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFG 468

The following BLAST results are available for this feature:

BLAST of TCONS_00028759-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028759-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
S22AF	2.952e-42	26.81	Solute carrier family 22 member 15 OS=Homo sapiens...	[more]

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TCONS_00028759-protein (polypeptide) - C. hemisphaerica