TCONS_00029540-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00029540-protein
Unique NameTCONS_00029540-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length195

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00029540-protein ID=TCONS_00029540-protein|Name=TCONS_00029540-protein|organism=Clytia hemisphaerica|type=polypeptide|length=195bp
MNTFGNLLRVLPRVPLLPTQRLLIVPSSNRICGALNSTWVPDNLPKYRDG
FNEIPELETADPVVQKLFSLEMADGIETRKVLRTINTDKYETKLEKNIAN
NTLHIRMLVEQLKQNHKDKQNKVFLIWAIDQRKKRLRRLQKLDINKYNSL
IEEYDIPPLESPQDPQNKYKFRKFKINVPLEKKRNIEDFEKDRNY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016860XLOC_016860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00029540TCONS_00029540Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR009068S15_NS1_RNA-bd
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 78..157
e-value: 1.7E-4
score: 11.7
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 91..155
e-value: 2.3E-10
score: 40.4
NoneNo IPR availableGENE3D1.10.287.10coord: 64..157
e-value: 3.7E-9
score: 36.3
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 93..156

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029540-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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