TCONS_00044720-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044720-protein
Unique NameTCONS_00044720-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044720-protein ID=TCONS_00044720-protein|Name=TCONS_00044720-protein|organism=Clytia hemisphaerica|type=polypeptide|length=132bp
FLYFQIISGGNYKTKSELFQKLFKNLNPDEKLIIDYSCAFYRDILVHGRL
YASQNWLCFYANIFGWETLITVQWTDVTAITKEKTAKVIPNAIQVLTDQE
KFFFTTFVNRENAYTALFRIWQNALLGHVSFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028335XLOC_028335Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044720TCONS_00044720Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004182GRAM
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004182GRAM domainSMARTSM00568gram2001ccoord: 17..84
e-value: 5.9E-24
score: 95.6
IPR004182GRAM domainPFAMPF02893GRAMcoord: 17..124
e-value: 1.7E-25
score: 89.0
NoneNo IPR availableCDDcd13220PH-GRAM_GRAMDCcoord: 28..121
e-value: 2.24988E-49
score: 154.201

Blast
[Close]
BLAST of TCONS_00044720-protein vs. Swiss-Prot (Human)
Match: GRM1B (GRAM domain-containing protein 1B OS=Homo sapiens GN=GRAMD1B PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.595e-48
Identity = 72/115 (62.61%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:   12 YKTKSELFQKLFKNLNPDEKLIIDYSCAFYRDILVHGRLYASQNWLCFYANIFGWETLITVQWTDVTAITKEKTAKVIPNAIQVLTDQEKFFFTTFVNRENAYTALFRIWQNALL 126
            YK ++E F+KLFK L   E+LI+DYSCA  RDIL+ GRLY S+NW+CFY+NIF WETL+TV+  D+ ++TKEKTA++IPNAIQV TD EK FFT+F  R+  Y  +FR+WQNALL
Sbjct:   91 YKQRNEDFRKLFKQLPDTERLIVDYSCALQRDILLQGRLYLSENWICFYSNIFRWETLLTVRLKDICSMTKEKTARLIPNAIQVCTDSEKHFFTSFGARDRTYMMMFRLWQNALL 205
The following BLAST results are available for this feature:
BLAST of TCONS_00044720-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GRM1B1.595e-4862.61GRAM domain-containing protein 1B OS=Homo sapiens ... [more]
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