TCONS_00044782-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044782-protein
Unique NameTCONS_00044782-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length185

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044782-protein ID=TCONS_00044782-protein|Name=TCONS_00044782-protein|organism=Clytia hemisphaerica|type=polypeptide|length=185bp
CEFHDTQDEIVDQVIGGCNSKKLRKRLLKEHNLSLDKLLEIALVLETADH
QSVKYDTDKPHQHNKPVEEESDDCDGDNVNRISDRRPPRYPKSRISKTPH
TTRKLTCYRCGSDHLASECRIAKDKTCFNCGKKGHLKTVCQSKQNPNQQD
NPTIRYIAVEDSSSDDEFVLAXPGLEKAIPVIFFL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028393XLOC_028393Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044782TCONS_00044782Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 106..121
e-value: 0.27
score: 14.7
coord: 126..142
e-value: 0.0027
score: 26.9
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 125..140
e-value: 5.2E-4
score: 19.9
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 93..131
e-value: 3.6E-10
score: 39.0
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 132..156
e-value: 3.2E-6
score: 26.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 127..142
score: 9.438
IPR001878Zinc finger, CCHC-typeSUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 97..144

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044782-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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